Bostr.0556s0752 (Boechera stricta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Bostr.0556s0752 T246662_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD30
M01066_2.00 		Arabidopsis thaliana
BVWWWHVNGG
CCNBDWWWBV		 PBM
Sullivan et al.(2014)
pTH7467 		0.700 0.700
LBD30
M01067_2.00 		Arabidopsis thaliana
VWWWNVNGGD
HCCNBNWWWB		 PBM
Sullivan et al.(2014)
pTH7616 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.0556s0752.1.p LOB 9 99

Links

Other LOB family TFs
Other Boechera stricta TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10008050 Chelonia mydas Cmyd_10008050 I
ENSAMEG00000014717 Ailuropoda melanoleuca ENSAMEG00000014717 I
ENSAPLG00000013997 Anas platyrhynchos ENSAPLG00000013997 I
MYC Canis familiaris ENSCAFG00000001086 I
MYC Callithrix jacchus ENSCJAG00000012620 I
ENSCSAG00000010109 Chlorocebus sabaeus ENSCSAG00000010109 I
MYC Dasypus novemcinctus ENSDNOG00000048399 I
ENSDORG00000010277 Dipodomys ordii ENSDORG00000010277 I
MYC Erinaceus europaeus ENSEEUG00000001458 I
ENSFALG00000002546 Ficedula albicollis ENSFALG00000002546 I
MYC Felis catus ENSFCAG00000025438 I
MYC Homo sapiens ENSG00000136997 D
ENSGALG00000016308 Gallus gallus ENSGALG00000016308 I
MYC Gorilla gorilla ENSGGOG00000012135 I
MYC Loxodonta africana ENSLAFG00000001410 I
ENSMGAG00000015875 Meleagris gallopavo ENSMGAG00000015875 I
MYC Macaca mulatta ENSMMUG00000014601 I
ENSMMUP00000019164 Macaca fascicularis ENSMMUP00000019164 I
ENSMPUG00000001327 Mustela putorius furo ENSMPUG00000001327 I
Myc Mus musculus ENSMUSG00000022346 D
ENSNLEG00000005570 Nomascus leucogenys ENSNLEG00000005570 I
ENSOANG00000008107 Ornithorhynchus anatinus ENSOANG00000008107 I
MYC Oryctolagus cuniculus ENSOCUG00000014289 I
ENSPANG00000010418 Papio anubis ENSPANG00000010418 I
ENSPPYG00000018878 Pongo abelii ENSPPYG00000018878 I
ENSPSIG00000008301 Pelodiscus sinensis ENSPSIG00000008301 I
MYC Pan troglodytes ENSPTRG00000020581 I
Myc Rattus norvegicus ENSRNOG00000004500 I
MYC Sorex araneus ENSSARG00000010372 I
MYC Sus scrofa ENSSSCG00000005965 I
ENSSTOG00000004944 Ictidomys tridecemlineatus ENSSTOG00000004944 I
MYC Taeniopygia guttata ENSTGUG00000012513 I
MYC Vicugna pacos ENSVPAG00000005895 I
Gfo_R001095 Geospiza fortis Gfo_R001095 I