CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1671s0410
(
Capsella grandiflora
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Cagra.1671s0410
T246728_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1671s0410.1.p
LOB
32
130
PCAACKVLRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRADAVRSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQV
Links
Other
LOB
family TFs
Other
Capsella grandiflora
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000005420
Ailuropoda melanoleuca
ENSAMEG00000005420
N
ZNF7
Bos taurus
ENSBTAG00000018456
N
ZNF7
Choloepus hoffmanni
ENSCHOG00000001749
N
ZNF7
Callithrix jacchus
ENSCJAG00000021384
I
ENSCSAG00000008197
Chlorocebus sabaeus
ENSCSAG00000008197
I
ZNF7
Felis catus
ENSFCAG00000012559
N
ZNF7
Homo sapiens
ENSG00000147789
D
ZNF7
Gorilla gorilla
ENSGGOG00000008185
I
ZNF7
Macaca mulatta
ENSMMUG00000011550
I
ZNF7
Oryctolagus cuniculus
ENSOCUG00000022081
I
ENSP00000262259-D94
Bos grunniens
ENSP00000262259-D94
N
ENSP00000393260
Macaca fascicularis
ENSP00000393260
I
ENSPANG00000012142
Papio anubis
ENSPANG00000012142
I
ENSPPYG00000018994
Pongo abelii
ENSPPYG00000018994
I
ZNF7
Pan troglodytes
ENSPTRG00000020717
I
ZNF7
Sus scrofa
ENSSSCG00000005890
N
ENSSTOG00000021142
Ictidomys tridecemlineatus
ENSSTOG00000021142
I