CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000136037
(
Malus domestica
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
MDP0000136037
T247075_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000136037
LOB
4
107
SCNGCRILRKGCSENCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGQ
Links
Other
LOB
family TFs
Other
Malus domestica
TFs
198 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30072.m000986
Ricinus communis
30072.m000986
N
MYB3
Arabidopsis thaliana
AT1G22640
D
WER
Arabidopsis thaliana
AT5G14750
D
BGIOSGA002691
Oryza indica
BGIOSGA002691
N
Bra016164
Brassica rapa
Bra016164
N
Ca_11427
Cicer arietinum
Ca_11427
N
MDP0000581761
Malus domestica
MDP0000581761
N
mgf018170m
Mimulus guttatus
mgf018170m
N
OBART01G27550
Oryza barthii
OBART01G27550
N
OGLUM01G01950
Oryza glumaepatula
OGLUM01G01950
N
OMERI01G01270
Oryza meridionalis
OMERI01G01270
N
ONIVA01G01950
Oryza nivara
ONIVA01G01950
N
OPUNC01G01540
Oryza punctata
OPUNC01G01540
N
orange1.1g031483m.g
Citrus sinensis
orange1.1g031483m.g
N
OS01G0127450
Oryza sativa
OS01G0127450
N
TRIUR3_20385
Triticum urartu
TRIUR3_20385
N