CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
orange1.1g042591m.g
(
Citrus sinensis
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
orange1.1g042591m.g
T247170_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g042591m
LOB
8
106
ACAACKYQRRRCSSDCPLAPYFPADQPRLFQNAHKLFGRSNILSIIKPLDAERRAEAMRSIIYEANIRDRYPVHGCLGVVCQLQYQIWQVEAELRAAQA
Links
Other
LOB
family TFs
Other
Citrus sinensis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10003703
Chelonia mydas
Cmyd_10003703
N
THAP7
Canis familiaris
ENSCAFG00000030978
N
THAP7
Callithrix jacchus
ENSCJAG00000015921
N
THAP7
Cavia porcellus
ENSCPOG00000003147
N
ENSCSAG00000012875
Chlorocebus sabaeus
ENSCSAG00000012875
N
THAP7
Dasypus novemcinctus
ENSDNOG00000019491
N
Thap7
Dipodomys ordii
ENSDORG00000008098
N
THAP7
Equus caballus
ENSECAG00000021648
N
THAP7
Erinaceus europaeus
ENSEEUG00000011695
N
THAP7
Felis catus
ENSFCAG00000025571
N
THAP7
Homo sapiens
ENSG00000184436
N
THAP7
Gorilla gorilla
ENSGGOG00000025383
N
THAP7
Loxodonta africana
ENSLAFG00000008131
N
THAP7
Myotis lucifugus
ENSMLUG00000026496
N
ENSMMUG00000020483
Macaca mulatta
ENSMMUG00000020483
N
ENSMPUG00000003655
Mustela putorius furo
ENSMPUG00000003655
N
Thap7
Mus musculus
ENSMUSG00000022760
N
ENSNLEG00000000071
Nomascus leucogenys
ENSNLEG00000000071
N
THAP7
Oryctolagus cuniculus
ENSOCUG00000016516
N
THAP7
Otolemur garnettii
ENSOGAG00000033917
N
ENSP00000382084
Macaca fascicularis
ENSP00000382084
N
ENSPANG00000018658
Papio anubis
ENSPANG00000018658
N
THAP7
Procavia capensis
ENSPCAG00000015860
N
ENSPPYG00000012032
Pongo abelii
ENSPPYG00000012032
N
THAP7
Pan troglodytes
ENSPTRG00000014098
N
Thap7
Rattus norvegicus
ENSRNOG00000037967
N
THAP7
Sorex araneus
ENSSARG00000005093
N
ENSSSCG00000010098
Sus scrofa
ENSSSCG00000010098
N
THAP7
Tursiops truncatus
ENSTTRG00000009187
N
Myotis_brandtii_THAP7_10021815
Myotis brandtii
Myotis_brandtii_THAP7_10021815
N
Ogr01912
Ophisaurus gracilis
Ogr01912
N
Pvit_17659
Pogona vitticeps
Pvit_17659
N