PDK_20s1376911g004 (Phoenix dactylifera)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 PDK_20s1376911g004 T247458_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1376911g004 LOB 48 101

Links

Other LOB family TFs
Other Phoenix dactylifera TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02206 Capronia coronata A1O1_02206 N 0.000
A1O3_06928 Capronia epimyces A1O3_06928 N 0.000
A1O7_04752 Cladophialophora yegresii A1O7_04752 N 0.000
GMDG_02930 Pseudogymnoascus destructans GMDG_02930 N 0.000
HMPREF1120_03172 Exophiala dermatitidis HMPREF1120_03172 N 0.000
PV04_04498 Capronia semiimmersa PV04_04498 N 0.000
PV05_06232 Exophiala xenobiotica PV05_06232 N 0.000
PV05_08387 Exophiala xenobiotica PV05_08387 N 0.000
PV07_05309 Cladophialophora immunda PV07_05309 N 0.000
PV08_08642 Exophiala spinifera PV08_08642 N 0.000
PV11_02555 Exophiala sideris PV11_02555 N 0.000
TSTA_054290 Talaromyces stipitatus TSTA_054290 N 0.000
Z517_06419 Fonsecaea pedrosoi Z517_06419 N 0.000
Z518_00819 Rhinocladiella mackenziei Z518_00819 N 0.000
Z518_03126 Rhinocladiella mackenziei Z518_03126 N 0.000
Z519_08473 Cladophialophora bantiana Z519_08473 N 0.000