BGIOSGA016339 (Oryza indica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 BGIOSGA016339 T247945_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.872 0.686
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.872 0.686
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.872 0.686
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.825 0.614
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA016339-PA MADF 102 181

Links

Other MADF family TFs
Other Oryza indica TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BN946_scf184962.g68 Trametes cinnabarina BN946_scf184962.g68 N
CC1G_11281 Coprinopsis cinerea CC1G_11281 N
CERSUDRAFT_137226 Ceriporiopsis subvermispora CERSUDRAFT_137226 N
CY34DRAFT_71692 Suillus luteus CY34DRAFT_71692 N
DICSQDRAFT_183662 Dichomitus squalens DICSQDRAFT_183662 N
fgenesh1_pg.C_scaffold_4000544 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000544 N
fgenesh2_pg.C_scaffold_4000190 Heterobasidion annosum fgenesh2_pg.C_scaffold_4000190 N
FIBRA_07699 Fibroporia radiculosa FIBRA_07699 N
GLOTRDRAFT_118184 Gloeophyllum trabeum GLOTRDRAFT_118184 N
HETIRDRAFT_314002 Heterobasidion irregulare HETIRDRAFT_314002 N
HYDPIDRAFT_111320 Hydnomerulius pinastri HYDPIDRAFT_111320 N
K443DRAFT_349539 Laccaria amethystina K443DRAFT_349539 N
LACBIDRAFT_305344 Laccaria bicolor LACBIDRAFT_305344 N
M378DRAFT_12877 Amanita muscaria M378DRAFT_12877 N
M404DRAFT_994800 Pisolithus tinctorius M404DRAFT_994800 N
M413DRAFT_445274 Hebeloma cylindrosporum M413DRAFT_445274 N
Moror_2913 Moniliophthora roreri Moror_2913 N
MPER_03826 Moniliophthora perniciosa MPER_03826 N
PAXRUDRAFT_826354 Paxillus rubicundulus PAXRUDRAFT_826354 N
PHACADRAFT_208262 Phanerochaete carnosa PHACADRAFT_208262 N
PILCRDRAFT_820042 Piloderma croceum PILCRDRAFT_820042 N
PISMIDRAFT_8428 Pisolithus microcarpus PISMIDRAFT_8428 N
PLEOSDRAFT_1098618 Pleurotus ostreatus PLEOSDRAFT_1098618 N
SCHCODRAFT_106746 Schizophyllum commune SCHCODRAFT_106746 N
SCLCIDRAFT_784092 Scleroderma citrinum SCLCIDRAFT_784092 N
SERLA73DRAFT_72210 Serpula lacrymans SERLA73DRAFT_72210 N