CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NAIF1
(
Loxodonta africana
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
ENSLAFG00000031104
T248323_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAIF1_CHICK
M01260_2.00
Gallus gallus
NNNDRCGTAN
NTACGYHNNN
PBM
Lambert et al.(2019)
pTH9808
0.950
0.754
naif1.S
M02282_2.00
Xenopus laevis
NNDRCGTAN
NTACGYHNN
PBM
Weirauch et al.(2014)
pTH9299
0.858
0.632
naif1
M02281_2.00
Xenopus tropicalis
NNNCGYANN
NNTRCGNNN
PBM
Weirauch et al.(2014)
pTH8560
0.856
0.579
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000024335
MADF
39
100
VPLAAKSAAWHGILRRVNAVATCRRELPEVKKKWSDLKTEVRRKVAQVRAAVEGGEVPGPTE
Links
Other
MADF
family TFs
Other
Loxodonta africana
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CANTEDRAFT_115344
Candida tenuis
CANTEDRAFT_115344
N
0.000
estExt_fgenesh1_pg.C_chr_1.20168
Pichia stipitis
estExt_fgenesh1_pg.C_chr_1.20168
N
0.000
G210_2469
Candida maltosa
G210_2469
N
0.000
GNLVRS01_PISO0E10256g
Millerozyma farinosa
GNLVRS01_PISO0E10256g
N
0.000
Kwal_15946
Kluyveromyces waltii
Kwal_15946
N
0.000
LELG_03400
Lodderomyces elongisporus
LELG_03400
N
0.000
PGUG_04373
Candida guilliermondii
PGUG_04373
N
0.000
PICST_66620
Scheffersomyces stipitis
PICST_66620
N
0.000
SAKL0B05434g
Lachancea kluyveri
SAKL0B05434g
N
0.000
SPAPADRAFT_62218
Spathaspora passalidarum
SPAPADRAFT_62218
N
0.000