CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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naif1
(
Takifugu rubripes
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
ENSTRUG00000013589
T248428_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
naif1.S
M02282_2.00
Xenopus laevis
NNDRCGTAN
NTACGYHNN
PBM
Weirauch et al.(2014)
pTH9299
0.894
0.531
naif1
M02281_2.00
Xenopus tropicalis
NNNCGYANN
NNTRCGNNN
PBM
Weirauch et al.(2014)
pTH8560
0.894
0.506
NAIF1_CHICK
M01260_2.00
Gallus gallus
NNNDRCGTAN
NTACGYHNNN
PBM
Lambert et al.(2019)
pTH9808
0.865
0.395
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000034710
MADF
20
107
LVEEIEKQKHTLVNHFNAGVTHMAKNKAWVDILKKVNAVTTCPRELPEVKKKWSDMKTEVRRKVAQARAAIEGTSADSAPVPVILTAM
ENSTRUP00000034711
MADF
24
111
LVEEIEKQKHTLVNHFNAGVTHMAKNKAWVDILKKVNAVTTCPRELPEVKKKWSDMKTEVRRKVAQARAAIEGTSADSAPVPVILTAM
Links
Other
MADF
family TFs
Other
Takifugu rubripes
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_00036
Arthroderma benhamiae
ARB_00036
N
CIMG_03315
Coccidioides immitis
CIMG_03315
N
CPC735_008860
Coccidioides posadasii
CPC735_008860
N
EURHEDRAFT_412508
Aspergillus ruber
EURHEDRAFT_412508
N
H102_00975
Trichophyton rubrum
H102_00975
N
H105_00981
Trichophyton soudanense
H105_00981
N
MCYG_00422
Microsporum canis
MCYG_00422
N
MGYG_01541
Microsporum gypseum
MGYG_01541
N
TEQG_03646
Trichophyton equinum
TEQG_03646
N
UREG_07144
Uncinocarpus reesii
UREG_07144
N