CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM10G18860
(
Oryza glumaepatula
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
OGLUM10G18860
T249551_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM10G18860.1
MADF
61
141
LIEAYRDRWEGLRKGNLRASDWDDVAGAVTARCGRFPTATHKSGVQCRHKIEKLRKRYRAERARAAGRSKGPKWPFFPLLH
Links
Other
MADF
family TFs
Other
Oryza glumaepatula
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CCA1
Arabidopsis thaliana
AT2G46830
D
BGIOSGA018757
Oryza indica
BGIOSGA018757
I
Bo4g006930
Brassica oleracea
Bo4g006930
I
Bostr.25993s0083
Boechera stricta
Bostr.25993s0083
I
Bra004503
Brassica rapa
Bra004503
I
BRADI2G34670
Brachypodium distachyon
BRADI2G34670
I
Cagra.0050s0017
Capsella grandiflora
Cagra.0050s0017
I
Carubv10022831m.g
Capsella rubella
Carubv10022831m.g
I
EuGene.0400010070
Ostreococcus RCC809
EuGene.0400010070
I
e_gw1.06.00.251.1
Ostreococcus tauri
e_gw1.06.00.251.1
N
F775_22448
Aegilops tauschii
F775_22448
I
GRMZM2G170322
Zea mays
GRMZM2G170322
I
GRMZM2G415077
Zea mays
GRMZM2G415077
N
LPERR05G03900
Leersia perrieri
LPERR05G03900
I
MLOC_5590
Hordeum vulgare
MLOC_5590
I
OB05G14050
Oryza brachyantha
OB05G14050
I
OBART05G04360
Oryza barthii
OBART05G04360
I
OBART05G04370
Oryza barthii
OBART05G04370
I
OGLUM05G04280
Oryza glumaepatula
OGLUM05G04280
I
OMERI05G04320
Oryza meridionalis
OMERI05G04320
I
ONIVA05G04710
Oryza nivara
ONIVA05G04710
I
ORUFI05G04560
Oryza rufipogon
ORUFI05G04560
I
OS05G0162800
Oryza sativa
OS05G0162800
I
Pavir.J12412
Panicum virgatum
Pavir.J12412
N
Sb01g012460
Sorghum bicolor
Sb01g012460
I
CCA1
Arabidopsis lyrata
scaffold_403655.1
I
Si038786m.g
Setaria italica
Si038786m.g
I
Traes_1BS_24DBD38A8
Triticum aestivum
Traes_1BS_24DBD38A8
I
TRIUR3_24634
Triticum urartu
TRIUR3_24634
I