CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_029209
(
Theobroma cacao
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
TCM_029209
T249943_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ASIL2
M06973_2.00
Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA
Dap-seq
OMalley et al.(2016)
At3g14180_col
0.823
0.761
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY27343
MADF
97
174
AWGERYLELSRGNLKQKHWKEVADIVSGREDYTKTPKTDIQCKNRIDTVKKKYKLEKAKIAGGGGPSKWVFFEKLDQL
Links
Other
MADF
family TFs
Other
Theobroma cacao
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB08131.1
Alternaria brassicicola
AB08131.1
N
0.000
AB10540.1
Alternaria brassicicola
AB10540.1
N
0.000
ARB_01056
Arthroderma benhamiae
ARB_01056
N
0.000
BDDG_00151
Blastomyces dermatitidis
BDDG_00151
N
0.000
ACLA_046870
Aspergillus clavatus
CADACLAG00004684
N
0.000
AFUA_4G07560
Aspergillus fumigatus
CADAFUAG00008022
N
0.000
NFIA_108640
Neosartorya fischeri
CADNFIAG00010194
N
0.000
COCC4DRAFT_194294
Bipolaris maydis
COCC4DRAFT_194294
N
0.000
COCCADRAFT_22008
Bipolaris zeicola
COCCADRAFT_22008
N
0.000
COCMIDRAFT_26521
Bipolaris oryzae
COCMIDRAFT_26521
N
0.000
COCSADRAFT_147534
Bipolaris sorokiniana
COCSADRAFT_147534
N
0.000
COCVIDRAFT_33489
Bipolaris victoriae
COCVIDRAFT_33489
N
0.000
fgenesh1_pg.C_scaffold_14000107
Cochliobolus heterostrophus C5
fgenesh1_pg.C_scaffold_14000107
N
0.000
H101_03515
Trichophyton interdigitale
H101_03515
N
0.000
H102_06195
Trichophyton rubrum
H102_06195
N
0.000
H105_06234
Trichophyton soudanense
H105_06234
N
0.000
HCBG_00082
Histoplasma capsulatum
HCBG_00082
N
0.000
LEMA_P063520.1
Leptosphaeria maculans
LEMA_P063520.1
N
0.000
MCYG_07183
Arthroderma otae
MCYG_07183
N
0.000
MCYG_07183
Microsporum canis
MCYG_07183
N
0.000
MGYG_04684
Microsporum gypseum
MGYG_04684
N
0.000
MPH_08084
Macrophomina phaseolina
MPH_08084
N
0.000
PABG_01478
Paracoccidioides brasiliensis
PABG_01478
N
0.000
PDIP_12360
Penicillium digitatum
PDIP_12360
N
0.000
PEX1_089410
Penicillium expansum
PEX1_089410
N
0.000
PFICI_11537
Pestalotiopsis fici
PFICI_11537
N
0.000
PITC_006180
Penicillium italicum
PITC_006180
N
0.000
PTRG_08751
Pyrenophora triticirepentis
PTRG_08751
N
0.000
PTT_14570
Pyrenophora teres
PTT_14570
N
0.000
SBOR_5966
Sclerotinia borealis
SBOR_5966
N
0.000
SETTUDRAFT_182079
Setosphaeria turcica
SETTUDRAFT_182079
N
0.000
SNOG_03792
Phaeosphaeria nodorum
SNOG_03792
N
0.000
SNOG_03792
Stagonospora nodorum
SNOG_03792
N
0.000
TEQG_05179
Trichophyton equinum
TEQG_05179
N
0.000
TESG_04140
Trichophyton tonsurans
TESG_04140
N
0.000
TRV_02827
Trichophyton verrucosum
TRV_02827
N
0.000
UCRPA7_1672
Togninia minima
UCRPA7_1672
N
0.000