Cla019967 (Citrullus lanatus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Cla019967 T250138_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.831 0.603
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.831 0.603
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla019967 MADF 36 116

Links

Other MADF family TFs
Other Citrullus lanatus TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDP1 Aedes aegypti AAEL005255 I 0.000
AALB004300 Anopheles albimanus AALB004300 I 0.000
Aan_R013230 Calypte anna Aan_R013230 I 0.000
AARA000887 Anopheles arabiensis AARA000887 I 0.000
ACOM039838 Anopheles coluzzii ACOM039838 I 0.000
ACUA004794 Anopheles culicifacies ACUA004794 I 0.000
ADAC004162 Anopheles darlingi ADAC004162 I 0.000
ADIR007438 Anopheles dirus ADIR007438 I 0.000
AEPI005427 Anopheles epiroticus AEPI005427 I 0.000
AFAF017409 Anopheles farauti AFAF017409 I 0.000
Afo_R007951 Aptenodytes forsteri Afo_R007951 I 0.000
AFUN000141 Anopheles funestus AFUN000141 I 0.000
PDP1 Anopheles gambiae AGAP006376 I 0.000
Alligator_sinensis_CCG007983.1 Alligator sinensis Alligator_sinensis_CCG007983.1 I 0.000
Alligator_sinensis_CCG020587.1 Alligator sinensis Alligator_sinensis_CCG020587.1 I 0.000
AMEM018156 Anopheles merus AMEM018156 I 0.000
AMIN007990 Anopheles minimus AMIN007990 I 0.000
AQUA000938 Anopheles quadriannulatus AQUA000938 I 0.000
ASIS001542 Anopheles sinensis ASIS001542 I 0.000
ASTEI09431 Anopheles stephensi ASTEI09431 I 0.000
Brh_R010854 Buceros rhinoceros Brh_R010854 I 0.000
CGI_10008414 Crassostrea gigas CGI_10008414 I 0.000
PDP1 Culex quinquefasciatus CPIJ014920 I 0.000
CpipJ_CPIJ014920 Culex pipiens CpipJ_CPIJ014920 I 0.000
TEF Anolis carolinensis ENSACAG00000004810 I 0.000
ENSAMEG00000002146 Ailuropoda melanoleuca ENSAMEG00000002146 I 0.000
ENSAMXG00000008798 Astyanax mexicanus ENSAMXG00000008798 I 0.000
ENSAMXG00000015442 Astyanax mexicanus ENSAMXG00000015442 I 0.000
ENSAMXG00000017639 Astyanax mexicanus ENSAMXG00000017639 I 0.000
ENSAPLG00000005838 Anas platyrhynchos ENSAPLG00000005838 I 0.000
TEF Bos taurus ENSBTAG00000016580 I 0.000
ENSBTAP00000022056-D1 Bos grunniens ENSBTAP00000022056-D1 I 0.000
TEF Canis familiaris ENSCAFG00000001095 I 0.000
TEF Callithrix jacchus ENSCJAG00000004977 I 0.000
TEF Cavia porcellus ENSCPOG00000020591 I 0.000
ENSCSAG00000005816 Chlorocebus sabaeus ENSCSAG00000005816 I 0.000
tefa Danio rerio ENSDARG00000039117 I 0.000
hlfa Danio rerio ENSDARG00000074752 I 0.000
tefb Danio rerio ENSDARG00000098103 I 0.000
TEF Dasypus novemcinctus ENSDNOG00000035257 I 0.000
Tef Dipodomys ordii ENSDORG00000014982 I 0.000
TEF Equus caballus ENSECAG00000018137 I 0.000
ENSFALG00000011967 Ficedula albicollis ENSFALG00000011967 I 0.000
TEF Felis catus ENSFCAG00000003674 I 0.000
TEF Homo sapiens ENSG00000167074 D 0.000
tefa Gasterosteus aculeatus ENSGACG00000004793 I 0.000
tefb Gasterosteus aculeatus ENSGACG00000007628 I 0.000
TEF Gallus gallus ENSGALG00000011958 I 0.000
TEF Gorilla gorilla ENSGGOG00000016460 I 0.000
ENSGMOG00000014488 Gadus morhua ENSGMOG00000014488 I 0.000
ENSLACG00000012701 Latimeria chalumnae ENSLACG00000012701 I 0.000
TEF Loxodonta africana ENSLAFG00000013151 I 0.000
ENSMEUG00000013604 Macropus eugenii ENSMEUG00000013604 I 0.000
TEF Meleagris gallopavo ENSMGAG00000012262 I 0.000
ENSMICG00000013518 Microcebus murinus ENSMICG00000013518 I 0.000
TEF Myotis lucifugus ENSMLUG00000002459 I 0.000
TEF Macaca mulatta ENSMMUG00000005221 I 0.000
TEF Monodelphis domestica ENSMODG00000016547 I 0.000
ENSMPUG00000016407 Mustela putorius furo ENSMPUG00000016407 I 0.000
Tef Mus musculus ENSMUSG00000022389 D 0.000
ENSNLEG00000015473 Nomascus leucogenys ENSNLEG00000015473 I 0.000
HLF Ornithorhynchus anatinus ENSOANG00000010288 I 0.000
TEF Ornithorhynchus anatinus ENSOANG00000011535 I 0.000
ENSOARG00000018238 Ovis aries ENSOARG00000018238 I 0.000
TEF Oryctolagus cuniculus ENSOCUG00000012866 I 0.000
TEF Otolemur garnettii ENSOGAG00000025997 I 0.000
ENSONIG00000008480 Oreochromis niloticus ENSONIG00000008480 I 0.000
ENSONIG00000009563 Oreochromis niloticus ENSONIG00000009563 I 0.000
ENSONIG00000019694 Oreochromis niloticus ENSONIG00000019694 I 0.000
TEF Ochotona princeps ENSOPRG00000013592 I 0.000
hlfa Oryzias latipes ENSORLG00000000969 I 0.000
tefa Oryzias latipes ENSORLG00000002582 I 0.000
tefb Oryzias latipes ENSORLG00000014144 I 0.000
ENSP00000403078 Macaca fascicularis ENSP00000403078 I 0.000
ENSPANG00000024579 Papio anubis ENSPANG00000024579 I 0.000
ENSPFOG00000013950 Poecilia formosa ENSPFOG00000013950 I 0.000
ENSPFOG00000016821 Poecilia formosa ENSPFOG00000016821 I 0.000
ENSPFOG00000018222 Poecilia formosa ENSPFOG00000018222 I 0.000
ENSPPYG00000011867 Pongo abelii ENSPPYG00000011867 I 0.000
ENSPSIG00000006835 Pelodiscus sinensis ENSPSIG00000006835 I 0.000
TEF Pan troglodytes ENSPTRG00000014425 I 0.000
TEF Pteropus vampyrus ENSPVAG00000001160 I 0.000
Tef Rattus norvegicus ENSRNOG00000019383 I 0.000
TEF Sorex araneus ENSSARG00000003323 I 0.000
ENSSHAG00000009361 Sarcophilus harrisii ENSSHAG00000009361 I 0.000
ENSSTOG00000019642 Ictidomys tridecemlineatus ENSSTOG00000019642 I 0.000
TEF Tupaia belangeri ENSTBEG00000010576 I 0.000
TEF Taeniopygia guttata ENSTGUG00000009944 I 0.000
tefa Tetraodon nigroviridis ENSTNIG00000012940 I 0.000
tefb Takifugu rubripes ENSTRUG00000003565 I 0.000
hlfb Takifugu rubripes ENSTRUG00000003909 I 0.000
tefa Takifugu rubripes ENSTRUG00000017028 I 0.000
ENSTSYG00000008965 Tarsius syrichta ENSTSYG00000008965 I 0.000
TEF Tursiops truncatus ENSTTRG00000003365 I 0.000
TEF Vicugna pacos ENSVPAG00000002612 I 0.000
ENSXMAG00000000678 Xiphophorus maculatus ENSXMAG00000000678 I 0.000
e_gw.273.32.1 Branchiostoma floridae e_gw.273.32.1 I 0.000
e_gw.273.54.1 Branchiostoma floridae e_gw.273.54.1 I 0.000
Gfo_R004744 Geospiza fortis Gfo_R004744 I 0.000
Myotis_brandtii_Tef_10013968 Myotis brandtii Myotis_brandtii_Tef_10013968 I 0.000
Ogr00037 Ophisaurus gracilis Ogr00037 I 0.000
Ogr14443 Ophisaurus gracilis Ogr14443 I 0.000
Pvit_18616 Pogona vitticeps Pvit_18616 I 0.000
SMAR002779 Strigamia maritima SMAR002779 I 0.000
Tal_R002658 Tyto alba Tal_R002658 I 0.000