28077.m000081 (Ricinus communis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 28077.m000081 T250435_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.895 0.639
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.895 0.639
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.895 0.639
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.859 0.597
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
28077.m000081 MADF 111 195

Links

Other MADF family TFs
Other Ricinus communis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP23984 Atta cephalotes ACEP23984 N
ACYPI010120 Acyrthosiphon pisum ACYPI010120 N
BGIBMGA006998 Bombyx mori BGIBMGA006998 N
Cflo_11504--XP_625193.1_APIME Camponotus floridanus Cflo_11504--XP_625193.1_APIME N
GB44345 Apis mellifera GB44345 N
HMEL002439 Heliconius melpomene HMEL002439 N
KGM_17736 Danaus plexippus KGM_17736 N
L798_00751 Zootermopsis nevadensis L798_00751 N
LDEC016293 Leptinotarsa decemlineata LDEC016293 N
MCINX008866 Melitaea cinxia MCINX008866 N
NV21329 Nasonia vitripennis NV21329 N
SINV16181 Solenopsis invicta SINV16181 N
TC006235 Tribolium castaneum TC006235 N
TriadG7110 Trichoplax adhaerens TriadG7110 N
YQE_09439 Dendroctonus ponderosae YQE_09439 N