Gorai.007G371500 (Gossypium raimondii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Gorai.007G371500 T250709_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.949 0.750
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.949 0.750
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.949 0.750
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.943 0.681
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G371500.1 MADF 113 189
Gorai.007G371500.2 MADF 113 189

Links

Other MADF family TFs
Other Gossypium raimondii TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_05319 Ancylostoma caninum ANCCAN_05319 N
HPLM_0000259001 Haemonchus placei HPLM_0000259001 N
HPLM_0000283201 Haemonchus placei HPLM_0000283201 N
NBR_0000978401 Nippostrongylus brasiliensis NBR_0000978401 N
NECAME_05891 Necator americanus NECAME_05891 N
TELCIR_12951 Teladorsagia circumcincta TELCIR_12951 N
TELCIR_17114 Teladorsagia circumcincta TELCIR_17114 N
TELCIR_19664 Teladorsagia circumcincta TELCIR_19664 N