Thhalv10000907m.g (Eutrema salsugineum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Thhalv10000907m.g T250863_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G47660
M02266_2.00 		Arabidopsis thaliana
RCGGTAAW
WTTACCGY		 PBM
Weirauch et al.(2014)
pTH7911 		0.911 0.795
AT5G47660
M06980_2.00 		Arabidopsis thaliana
RCRGTWAAAAHDDHW
WDHHDTTTTWACYGY		 Dap-seq
OMalley et al.(2016)
AT5G47660_col_a 		0.911 0.795
AT5G47660
M06981_2.00 		Arabidopsis thaliana
WHHHHRCRGTWAAWW
WWTTWACYGYDDDDW		 Dap-seq
OMalley et al.(2016)
AT5G47660_colamp_a 		0.911 0.795
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10000907m MADF 309 384

Links

Other MADF family TFs
Other Eutrema salsugineum TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000011233 Ailuropoda melanoleuca ENSAMEG00000011233 I 0.000
ZNF3 Bos taurus ENSBTAG00000007012 I 0.000
ENSBTAP00000037032-D1 Bos grunniens ENSBTAP00000037032-D1 I 0.000
ZNF3 Canis familiaris ENSCAFG00000018472 I 0.000
ZNF3 Callithrix jacchus ENSCJAG00000015656 I 0.000
ZNF3 Cavia porcellus ENSCPOG00000010860 I 0.000
ENSCSAG00000017832 Chlorocebus sabaeus ENSCSAG00000017832 I 0.000
ZNF3 Dasypus novemcinctus ENSDNOG00000010382 I 0.000
Zfp113 Dipodomys ordii ENSDORG00000000945 I 0.000
ZNF3 Equus caballus ENSECAG00000024649 I 0.000
ZNF3 Erinaceus europaeus ENSEEUG00000003422 I 0.000
ZNF3 Echinops telfairi ENSETEG00000002679 I 0.000
ZNF3 Felis catus ENSFCAG00000003560 I 0.000
ZNF3 Homo sapiens ENSG00000166526 D 0.000
ZNF3 Loxodonta africana ENSLAFG00000014618 I 0.000
ENSMEUG00000013213 Macropus eugenii ENSMEUG00000013213 I 0.000
ZNF3 Microcebus murinus ENSMICG00000003962 I 0.000
ZNF3 Myotis lucifugus ENSMLUG00000004466 I 0.000
ZNF3 Macaca mulatta ENSMMUG00000004021 I 0.000
ZNF3 Monodelphis domestica ENSMODG00000004159 I 0.000
Zfp113 Mus musculus ENSMUSG00000037007 I 0.000
ENSOARG00000017937 Ovis aries ENSOARG00000017937 I 0.000
ZNF3 Oryctolagus cuniculus ENSOCUG00000005390 I 0.000
ZNF3 Otolemur garnettii ENSOGAG00000006409 I 0.000
ZNF3 Ochotona princeps ENSOPRG00000003308 I 0.000
ENSP00000415358 Macaca fascicularis ENSP00000415358 I 0.000
ENSPANG00000011255 Papio anubis ENSPANG00000011255 I 0.000
ZNF3 Procavia capensis ENSPCAG00000015736 I 0.000
ENSPPYG00000017396 Pongo abelii ENSPPYG00000017396 I 0.000
ZNF3 Pan troglodytes ENSPTRG00000019470 I 0.000
ZNF3 Pteropus vampyrus ENSPVAG00000005182 I 0.000
Zfp113 Rattus norvegicus ENSRNOG00000001341 I 0.000
ENSSHAG00000011938 Sarcophilus harrisii ENSSHAG00000011938 I 0.000
ENSSTOG00000028734 Ictidomys tridecemlineatus ENSSTOG00000028734 I 0.000
ZNF3 Tupaia belangeri ENSTBEG00000013905 I 0.000
ENSTSYG00000013704 Tarsius syrichta ENSTSYG00000013704 I 0.000
ZNF3 Tursiops truncatus ENSTTRG00000012311 I 0.000