PK04914.1 (Cannabis sativa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 PK04914.1 T251167_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK04914.1
M01262_2.00		 Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.951 0.811
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.951 0.811
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.951 0.811
For this family, TFs with SR scores > 0.812 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01262_2.00 MADF 2 83

DNA Binding Domains

Protein ID Domain From To Sequence
PK04914.1 MADF 203 284

Links

Other MADF family TFs
Other Cannabis sativa TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_209430 Agaricus bisporus AGABI2DRAFT_209430 N
CC1G_11281 Coprinopsis cinerea CC1G_11281 N
CY34DRAFT_71692 Suillus luteus CY34DRAFT_71692 N
fgenesh1_pg.C_scaffold_4000544 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000544 N
fgenesh2_pg.C_scaffold_4000190 Heterobasidion annosum fgenesh2_pg.C_scaffold_4000190 N
FIBRA_07699 Fibroporia radiculosa FIBRA_07699 N
FOMPIDRAFT_1029514 Fomitopsis pinicola FOMPIDRAFT_1029514 N
GALMADRAFT_245970 Galerina marginata GALMADRAFT_245970 N
GLOTRDRAFT_118184 Gloeophyllum trabeum GLOTRDRAFT_118184 N
HETIRDRAFT_314002 Heterobasidion irregulare HETIRDRAFT_314002 N
HYDPIDRAFT_111320 Hydnomerulius pinastri HYDPIDRAFT_111320 N
JAAARDRAFT_207695 Jaapia argillacea JAAARDRAFT_207695 N
K443DRAFT_349539 Laccaria amethystina K443DRAFT_349539 N
LACBIDRAFT_305344 Laccaria bicolor LACBIDRAFT_305344 N
M404DRAFT_994800 Pisolithus tinctorius M404DRAFT_994800 N
M413DRAFT_445274 Hebeloma cylindrosporum M413DRAFT_445274 N
Moror_2913 Moniliophthora roreri Moror_2913 N
MPER_03826 Moniliophthora perniciosa MPER_03826 N
PAXRUDRAFT_826354 Paxillus rubicundulus PAXRUDRAFT_826354 N
PHACADRAFT_208262 Phanerochaete carnosa PHACADRAFT_208262 N
PHLGIDRAFT_100624 Phlebiopsis gigantea PHLGIDRAFT_100624 N
PILCRDRAFT_820042 Piloderma croceum PILCRDRAFT_820042 N
PISMIDRAFT_8428 Pisolithus microcarpus PISMIDRAFT_8428 N
SCLCIDRAFT_784092 Scleroderma citrinum SCLCIDRAFT_784092 N
SERLA73DRAFT_72210 Serpula lacrymans SERLA73DRAFT_72210 N