SVUK_0001242901 (Strongylus vulgaris)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 SVUK_0001242901 T252595_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
madf-5
M02276_2.00 		Caenorhabditis elegans
NNDCCGGHNN
NNDCCGGHNN		 PBM
Weirauch et al.(2014)
pTH9076 		0.857 0.747
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0001242901-mRNA-1 MADF 11 93

Links

Other MADF family TFs
Other Strongylus vulgaris TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RUNX2 Choloepus hoffmanni ENSCHOG00000005639 N
RUNX1 Choloepus hoffmanni ENSCHOG00000008686 N
Runx2 Dipodomys ordii ENSDORG00000007645 N
RUNX2 Procavia capensis ENSPCAG00000005288 N
RUNX1 Tupaia belangeri ENSTBEG00000000192 N
ENSTSYG00000008524 Tarsius syrichta ENSTSYG00000008524 N
RUNX2 Vicugna pacos ENSVPAG00000003613 N