CpipJ_CPIJ000253 (Culex pipiens)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 CpipJ_CPIJ000253 T252702_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mef2
M08214_2.00 		Drosophila melanogaster
YTAWWWWTAR
YTAWWWWTAR		 ChIP-seq
Contrino et al.(2012)
Mf26 		1.000 1.000
MEF2A
M03340_2.00 		Homo sapiens
KCTAWAAATAGM
KCTATTTWTAGM		 SELEX
Jolma et al.(2013)
MEF2A_1 		0.896 0.896
MEF2D
M03343_2.00 		Homo sapiens
DCTAWAAATAGM
KCTATTTWTAGH		 SELEX
Jolma et al.(2013)
MEF2D_1 		0.896 0.896
MEF2D
M05555_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2D_eDBD_HT-SELEX 		0.896 0.896
MEF2A
M07979_2.00 		Homo sapiens
NDDHYAAAAATARHH
DDYTATTTTTRDHHN		 ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2A_HudsonAlpha 		0.896 0.896
MEF2A
M08212_2.00 		Homo sapiens
CTAWWWWTAG
CTAWWWWTAG		 ChIP-seq
Contrino et al.(2012)
Mv88 		0.896 0.896
MEF2A
M08213_2.00 		Homo sapiens
AAAATAGM
KCTATTTT		 ChIP-seq
Contrino et al.(2012)
Mv90 		0.896 0.896
MEF2A
M09247_2.00 		Homo sapiens
DYYAAAAATAGMH
DKCTATTTTTRRH		 Misc
Kulakovskiy et al.(2013)
MEF2A_HUMAN.H11MO.0.A 		0.896 0.896
MEF2D
M09250_2.00 		Homo sapiens
CTAWAAATAGMH
DKCTATTTWTAG		 Misc
Kulakovskiy et al.(2013)
MEF2D_HUMAN.H11MO.0.A 		0.896 0.896
Mef2a
M09255_2.00 		Mus musculus
DDCYAWAAATARMH
DKYTATTTWTRGHH		 Misc
Kulakovskiy et al.(2013)
MEF2A_MOUSE.H11MO.0.A 		0.896 0.896
Mef2d
M09252_2.00 		Mus musculus
DDCTAWAAATAGMH
DKCTATTTWTAGHH		 Misc
Kulakovskiy et al.(2013)
MEF2D_MOUSE.H11MO.0.A 		0.896 0.896
Mef2a
M09599_2.00 		Mus musculus
CYNDAAATAG
CTATTTHNRG		 Misc
Heinz et al.(2010)
HL1-Mef2a.biotin_GSE21529 		0.896 0.896
MEF2A
M10933_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AMEF2_Q6 		0.896 0.896
MEF2A
M10934_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMEF2_Q6 		0.896 0.896
MEF2A
M10935_2.00 		Homo sapiens
BTCTAAAAATAACYCY
RGRGTTATTTTTAGAV		 Transfac
Matys et al.(2006)
V$MEF2_01 		0.896 0.896
MEF2A
M10936_2.00 		Homo sapiens
BNNNDDDCTAWAAATAGMHNNN
NNNDKCTATTTWTAGHHHNNNV		 Transfac
Matys et al.(2006)
V$MEF2_02 		0.896 0.896
MEF2A
M10937_2.00 		Homo sapiens
NNNNDWKCTAWAAATAGMHHNN
NNDDKCTATTTWTAGMWHNNNN		 Transfac
Matys et al.(2006)
V$MEF2_03 		0.896 0.896
MEF2A
M10938_2.00 		Homo sapiens
NVTGTTRCTAWAAATAGAAHHN
NDDWTCTATTTWTAGYAACABN		 Transfac
Matys et al.(2006)
V$MEF2_04 		0.896 0.896
MEF2A
M10939_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2A_05 		0.896 0.896
MEF2A
M10940_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2A_Q6 		0.896 0.896
MEF2D
M10957_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2D_Q4 		0.896 0.896
MEF2A
M10941_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2_Q6_02 		0.896 0.896
MEF2A
M10942_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MMEF2_Q6 		0.896 0.896
MEF2A
M10943_2.00 		Homo sapiens
NDKCTAWAAATAGMHH
DDKCTATTTWTAGMHN		 Transfac
Matys et al.(2006)
V$RSRFC4_01 		0.896 0.896
MEF2A
M10944_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RSRFC4_Q2 		0.896 0.896
MEF2D
M05556_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2D_eDBD_Methyl-HT-SELEX 		0.896 0.896
MEF2C
M02745_2.00 		Homo sapiens
TWCTAWAAATAG
CTATTTWTAGWA		 SELEX
Jolma et al.(2010)
MEF2C_dimer 		0.875 0.875
MEF2C
M05551_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2C_FL_HT-SELEX 		0.875 0.875
MEF2C
M08149_2.00 		Homo sapiens
NDDMYAAAAATAGMH
DKCTATTTTTRKHHN		 ChIP-seq
Mathelier et al.(2014)
MA0497.1 		0.875 0.875
MEF2C
M07980_2.00 		Homo sapiens
NDDYYAAAAATAGHH
DDCTATTTTTRRHHN		 ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2C_HudsonAlpha 		0.875 0.875
MEF2C
M09248_2.00 		Homo sapiens
DYYAAAAATARMH
DKYTATTTTTRRH		 Misc
Kulakovskiy et al.(2013)
MEF2C_HUMAN.H11MO.0.A 		0.875 0.875
Mef2c
M09253_2.00 		Mus musculus
DDMYAAAAATAGMHN
NDKCTATTTTTRKHH		 Misc
Kulakovskiy et al.(2013)
MEF2C_MOUSE.H11MO.0.A 		0.875 0.875
MEF2C
M09597_2.00 		Homo sapiens
DHYWDAAATARM
KYTATTTHWRDH		 Misc
Heinz et al.(2010)
GM12878-Mef2c_GSE32465 		0.875 0.875
MEF2C
M10945_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2C_02 		0.875 0.875
MEF2C
M10946_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2C_Q4 		0.875 0.875
MEF2C
M05552_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2C_FL_Methyl-HT-SELEX 		0.875 0.875
MEF2B
M03344_2.00 		Homo sapiens
RCTAWAAATAGM
KCTATTTWTAGY		 SELEX
Jolma et al.(2013)
MEF2B_1 		0.833 0.833
MEF2B
M05557_2.00 		Homo sapiens
CYNDWWWHGG
CCDWWWHNRG		 SELEX
Yin et al.(2017)
MEF2B_eDBD_HT-SELEX 		0.833 0.833
MEF2B
M05559_2.00 		Homo sapiens
CCVDWTATGGTAACA
TGTTACCATAWHBGG		 SELEX
Yin et al.(2017)
MEF2B_FL_HT-SELEX 		0.833 0.833
MEF2B
M09251_2.00 		Homo sapiens
CYWAAAATAGHHHH
DDDDCTATTTTWRG		 Misc
Kulakovskiy et al.(2013)
MEF2B_HUMAN.H11MO.0.A 		0.833 0.833
MEF2B
M05558_2.00 		Homo sapiens
CYWWWWWNGG
CCNWWWWWRG		 SELEX
Yin et al.(2017)
MEF2B_eDBD_Methyl-HT-SELEX 		0.833 0.833
MEF2B
M05560_2.00 		Homo sapiens
CCVDATATGGTAACR
YGTTACCATATHBGG		 SELEX
Yin et al.(2017)
MEF2B_FL_Methyl-HT-SELEX 		0.833 0.833
Mef2b
M10958_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2B_02 		0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ000253-RA MADS box 10 57

Links

Other MADS box family TFs
Other Culex pipiens TFs

484 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_00425 Capronia coronata A1O1_00425 N
A1O9_01477 Exophiala aquamarina A1O9_01477 N
ACRE_081730 Acremonium chrysogenum ACRE_081730 N
Bcin13g02910 Botrytis cinerea Bcin13g02910 N
BDDG_05783 Blastomyces dermatitidis BDDG_05783 N
BGHDH14_bgh00899 Blumeria graminis BGHDH14_bgh00899 N
ACLA_081950 Aspergillus clavatus CADACLAG00008081 N
ACLA_094500 Aspergillus clavatus CADACLAG00008494 N
CADAFLAG00003021 Aspergillus flavus CADAFLAG00003021 N
CADAFLAG00006464 Aspergillus flavus CADAFLAG00006464 N
AFUA_6G07780 Aspergillus fumigatus CADAFUAG00001723 N
CADANGAG00008607 Aspergillus niger CADANGAG00008607 N
ANIA_01924 Aspergillus nidulans CADANIAG00008584 N
CCM_04463 Cordyceps militaris CCM_04463 N
CFIO01_03461 Colletotrichum fioriniae CFIO01_03461 N
CH063_13085 Colletotrichum higginsianum CH063_13085 N
CIMG_01270 Coccidioides immitis CIMG_01270 N
CMQ_3880 Grosmannia clavigera CMQ_3880 N
Cob_10938 Colletotrichum orbiculare Cob_10938 N
CPC735_051300 Coccidioides posadasii CPC735_051300 N
CTHT_0043160 Chaetomium thermophilum CTHT_0043160 N
EPUS_01750 Endocarpon pusillum EPUS_01750 N
estExt_fgenesh3_kg.C_60109 Neurospora discreta estExt_fgenesh3_kg.C_60109 N
estExt_Genewise1Plus.C_90296 Cryphonectria parasitica estExt_Genewise1Plus.C_90296 N
estExt_Genewise1Plus.C_sca_2_chr3_3_00374 Nectria haematococca estExt_Genewise1Plus.C_sca_2_chr3_3_00374 N
EURHEDRAFT_515456 Aspergillus ruber EURHEDRAFT_515456 N
EV44_g6401 Erysiphe necator EV44_g6401 N
F503_00791 Ophiostoma piceae uamh F503_00791 N
FFUJ_05884 Fusarium fujikuroi FFUJ_05884 N
fgenesh1_pm.00118_#_476 Aspergillus carbonarius fgenesh1_pm.00118_#_476 N
FGRRES_08393 Fusarium graminearum FGRRES_08393 N
FOXG_03428 Fusarium oxysporum FOXG_03428 N
FPSE_09009 Fusarium pseudograminearum FPSE_09009 N
FVEG_02301 Fusarium verticillioides FVEG_02301 N
G647_00495 Cladophialophora carrionii G647_00495 N
GGTG_07704 Gaeumannomyces graminis GGTG_07704 N
GMDG_02924 Pseudogymnoascus destructans GMDG_02924 N
H101_07776 Trichophyton interdigitale H101_07776 N
H102_07414 Trichophyton rubrum H102_07414 N
H105_07444 Trichophyton soudanense H105_07444 N
HCBG_03077 Histoplasma capsulatum HCBG_03077 N
MAPG_11122 Magnaporthe poae MAPG_11122 N
MBM_06382 Marssonina brunnea MBM_06382 N
MCYG_00496 Arthroderma otae MCYG_00496 N
MCYG_00496 Microsporum canis MCYG_00496 N
MGG_07205 Magnaporthe oryzae MGG_07205 N
MGYG_01467 Microsporum gypseum MGYG_01467 N
MYCTH_2307010 Myceliophthora thermophila MYCTH_2307010 N
NCU04830 Neurospora crassa NCU04830 N
NechaG67124 Fusarium solani NechaG67124 N
NEUTE1DRAFT_68581 Neurospora tetrasperma NEUTE1DRAFT_68581 N
OCS_00082 Ophiocordyceps sinensis OCS_00082 N
OIDMADRAFT_136366 Oidiodendron maius OIDMADRAFT_136366 N
OIDMADRAFT_180132 Oidiodendron maius OIDMADRAFT_180132 N
PAAG_08210 Paracoccidioides sp lutzii PAAG_08210 N
PABG_07429 Paracoccidioides brasiliensis PABG_07429 N
Pc12g09470 Penicillium chrysogenum Pc12g09470 N
Pc15g01300 Penicillium chrysogenum Pc15g01300 N
PCH_Pc12g09470 Penicillium rubens PCH_Pc12g09470 N
PCH_Pc15g01300 Penicillium rubens PCH_Pc15g01300 N
PDE_08869 Penicillium oxalicum PDE_08869 N
PITC_095770 Penicillium italicum PITC_095770 N
PMAA_030720 Penicillium marneffei PMAA_030720 N
PMAA_030720 Talaromyces marneffei PMAA_030720 N
PODANS_4_9520 Podospora anserina PODANS_4_9520 N
PV04_01613 Capronia semiimmersa PV04_01613 N
PV05_11393 Exophiala xenobiotica PV05_11393 N
PV06_03188 Exophiala oligosperma PV06_03188 N
PV06_11178 Exophiala oligosperma PV06_11178 N
PV07_10227 Cladophialophora immunda PV07_10227 N
PV08_05648 Exophiala spinifera PV08_05648 N
PV10_03312 Exophiala mesophila PV10_03312 N
PVAR5_6218 Byssochlamys spectabilis PVAR5_6218 N
S40285_02676 Stachybotrys chlorohalonata S40285_02676 N
S40288_06143 Stachybotrys chartarum S40288_06143 N
SBOR_7105 Sclerotinia borealis SBOR_7105 N
SMAC_03468 Sordaria macrospora SMAC_03468 N
SPBR_01466 Sporothrix brasiliensis SPBR_01466 N
SS1G_09554 Sclerotinia sclerotiorum SS1G_09554 N
TEQG_06860 Trichophyton equinum TEQG_06860 N
TESG_04226 Trichophyton tonsurans TESG_04226 N
TRIATDRAFT_131396 Trichoderma atroviride TRIATDRAFT_131396 N
TRIREDRAFT_3856 Trichoderma reesei TRIREDRAFT_3856 N
TRIVIDRAFT_36706 Trichoderma virens TRIVIDRAFT_36706 N
TRV_00538 Trichophyton verrucosum TRV_00538 N
TSTA_002440 Talaromyces stipitatus TSTA_002440 N
TSTA_067470 Talaromyces stipitatus TSTA_067470 N
U727_00433560211 Penicillium solitum U727_00433560211 N
UREG_01201 Uncinocarpus reesii UREG_01201 N
V499_02602 Pseudogymnoascus pannorum V499_02602 N
VDAG_07460 Verticillium dahliae VDAG_07460 N
VDBG_09306 Verticillium alfalfae VDBG_09306 N
VDBG_09306 Verticillium albo atrum VDBG_09306 N
VHEMI06722 Torrubiella hemipterigena VHEMI06722 N