CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_10168
(
Verticillium albo atrum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
VDBG_10168
T252730_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_10168T0
MADS box
19
66
EIRKSRKRAATKFSKRRKTFLRRAHDLSQDCQAKVYTFIEYNRRTWVF
Links
Other
MADS box
family TFs
Other
Verticillium albo atrum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R008279
Calypte anna
Aan_R008279
I
Afo_R009036
Aptenodytes forsteri
Afo_R009036
I
Brh_R008652
Buceros rhinoceros
Brh_R008652
I
ANHX
Bos taurus
ENSBTAG00000026626
I
ANHX
Canis familiaris
ENSCAFG00000005892
I
ENSCJAG00000002388
Callithrix jacchus
ENSCJAG00000002388
I
ENSCSAG00000001805
Chlorocebus sabaeus
ENSCSAG00000001805
I
ANHX
Dasypus novemcinctus
ENSDNOG00000037821
I
ANHX
Equus caballus
ENSECAG00000013669
I
ENSFALG00000007397
Ficedula albicollis
ENSFALG00000007397
I
ANHX
Felis catus
ENSFCAG00000030622
I
ANHX
Homo sapiens
ENSG00000227059
D
ANHX
Gorilla gorilla
ENSGGOG00000024900
I
ENSLAFG00000028773
Loxodonta africana
ENSLAFG00000028773
I
ANHX
Myotis lucifugus
ENSMLUG00000022300
I
ANHX
Macaca mulatta
ENSMMUG00000001259
I
ENSOARG00000008922
Ovis aries
ENSOARG00000008922
I
ANHX
Oryctolagus cuniculus
ENSOCUG00000024082
I
ANHX
Otolemur garnettii
ENSOGAG00000026442
I
ENSP00000409950
Macaca fascicularis
ENSP00000409950
I
ENSPANG00000016069
Papio anubis
ENSPANG00000016069
I
ENSPSIG00000013281
Pelodiscus sinensis
ENSPSIG00000013281
I
ENSTGUG00000009899
Taeniopygia guttata
ENSTGUG00000009899
I
Gfo_R010890
Geospiza fortis
Gfo_R010890
I
Myotis_brandtii_ceh_10005230
Myotis brandtii
Myotis_brandtii_ceh_10005230
I
Ogr14831
Ophisaurus gracilis
Ogr14831
I
Tal_R010403
Tyto alba
Tal_R010403
I