BN7_244 (Wickerhamomyces ciferrii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 BN7_244 T253035_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.700 0.700
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCH40710 MADS box 1 31

Links

Other MADS box family TFs
Other Wickerhamomyces ciferrii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1645_YBR182C Saccharomyces bayanus 1645_YBR182C I 0.700
CANTEDRAFT_125008 Candida tenuis CANTEDRAFT_125008 I 0.700
CaO19.12132 Candida albicans CaO19.12132 I 0.733
CaO19.4662 Candida albicans CaO19.4662 I 0.733
CD36_41250 Candida dubliniensis CD36_41250 I 0.700
CLUG_04340 Clavispora lusitaniae CLUG_04340 I 0.700
CLUG_04340 Candida lusitaniae CLUG_04340 I 0.700
CPAG_01728 Candida parapsilosis CPAG_01728 I 0.700
CTRG_00027 Candida tropicalis CTRG_00027 I 0.733
DEHA2B02882g Debaryomyces hansenii DEHA2B02882g I 0.733
G210_1171 Candida maltosa G210_1171 I 0.700
GNLVRS01_PISO0N23201g Millerozyma farinosa GNLVRS01_PISO0N23201g I 0.700
KLLA0_E24025g Kluyveromyces lactis KLLA0_E24025g I 0.700
Kpol_1048p48 Vanderwaltozyma polyspora Kpol_1048p48 I 0.733
LALA0_S04e02938g Lachancea lanzarotensis LALA0_S04e02938g I 0.700
NCAS_0C01980 Naumovozyma castellii NCAS_0C01980 I 0.700
PGUG_02571 Meyerozyma guilliermondii PGUG_02571 I 0.833
PGUG_02571 Candida guilliermondii PGUG_02571 I 0.833
SAKL0H09416g Lachancea kluyveri SAKL0H09416g I 0.700
Scas_Contig664.4 Saccharomyces castellii Scas_Contig664.4 I 0.700
SU7_0243 Saccharomyces arboricola SU7_0243 I 0.700