CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra003884
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra003884
T253228_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra003884.1-P
MADS box
51
98
EIQEENRRQVTFSKRRTGLFKKAAELSVLCGAQIGIITFSRCERIYVF
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_209430
Agaricus bisporus
AGABI2DRAFT_209430
N
CC1G_11281
Coprinopsis cinerea
CC1G_11281
N
CY34DRAFT_71692
Suillus luteus
CY34DRAFT_71692
N
GALMADRAFT_245970
Galerina marginata
GALMADRAFT_245970
N
HYDPIDRAFT_111320
Hydnomerulius pinastri
HYDPIDRAFT_111320
N
K443DRAFT_349539
Laccaria amethystina
K443DRAFT_349539
N
LACBIDRAFT_305344
Laccaria bicolor
LACBIDRAFT_305344
N
M378DRAFT_12877
Amanita muscaria
M378DRAFT_12877
N
M404DRAFT_994800
Pisolithus tinctorius
M404DRAFT_994800
N
M413DRAFT_445274
Hebeloma cylindrosporum
M413DRAFT_445274
N
PAXRUDRAFT_826354
Paxillus rubicundulus
PAXRUDRAFT_826354
N
PILCRDRAFT_820042
Piloderma croceum
PILCRDRAFT_820042
N
PISMIDRAFT_8428
Pisolithus microcarpus
PISMIDRAFT_8428
N
SCLCIDRAFT_784092
Scleroderma citrinum
SCLCIDRAFT_784092
N