CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra028965
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra028965
T253336_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra028965.1-P
MADS box
10
54
RITNEKTRITTYRKRKECLFKKANEFSTLCGVNTCLIVYGPTRAG
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CANTEDRAFT_116020
Candida tenuis
CANTEDRAFT_116020
N
CaO19.2119
Candida albicans
CaO19.2119
N
CaO19.9667
Candida albicans
CaO19.9667
N
CD36_15120
Candida dubliniensis
CD36_15120
N
CORT_0A12970
Candida orthopsilosis
CORT_0A12970
N
CPAG_04608
Candida parapsilosis
CPAG_04608
N
CTRG_01097
Candida tropicalis
CTRG_01097
N
DEHA2A07282g
Debaryomyces hansenii
DEHA2A07282g
N
estExt_gwp_genewisePlus_worm.C_chr_2.10311
Pichia stipitis
estExt_gwp_genewisePlus_worm.C_chr_2.10311
N
G210_4959
Candida maltosa
G210_4959
N
GNLVRS01_PISO0C05414g
Millerozyma farinosa
GNLVRS01_PISO0C05414g
N
GNLVRS01_PISO0D05503g
Millerozyma farinosa
GNLVRS01_PISO0D05503g
N
LELG_01178
Lodderomyces elongisporus
LELG_01178
N
PGUG_02096
Meyerozyma guilliermondii
PGUG_02096
N
PICST_81430
Scheffersomyces stipitis
PICST_81430
N
SPAPADRAFT_60902
Spathaspora passalidarum
SPAPADRAFT_60902
N