CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGGC5_4984
(
Colletotrichum gloeosporioides
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
CGGC5_4984
T253486_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
srfA
M02283_2.00
Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK
PBM
Weirauch et al.(2014)
pTH5539
0.850
0.850
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ELA35218
MADS box
61
82
FINDKSRRHITFSKRKAETGLV
Links
Other
MADS box
family TFs
Other
Colletotrichum gloeosporioides
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB00182.1
Alternaria brassicicola
AB00182.1
N
0.000
COCC4DRAFT_78344
Bipolaris maydis
COCC4DRAFT_78344
N
0.000
COCCADRAFT_36920
Bipolaris zeicola
COCCADRAFT_36920
N
0.000
COCMIDRAFT_373
Bipolaris oryzae
COCMIDRAFT_373
N
0.000
COCVIDRAFT_84024
Bipolaris victoriae
COCVIDRAFT_84024
N
0.000
CSUB01_05147
Colletotrichum sublineola
CSUB01_05147
N
0.000
FPSE_05040
Fusarium pseudograminearum
FPSE_05040
N
0.000
GSTUM_00005291001
Tuber melanosporum
GSTUM_00005291001
N
0.000
LEMA_P080710.1
Leptosphaeria maculans
LEMA_P080710.1
N
0.000
PTT_19583
Pyrenophora teres
PTT_19583
N
0.000
PV09_05386
Verruconis gallopava
PV09_05386
N
0.000
SETTUDRAFT_102623
Setosphaeria turcica
SETTUDRAFT_102623
N
0.000