Cob_13332 (Colletotrichum orbiculare)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Cob_13332 T253506_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.771 0.771
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.771 0.771
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENH77322 MADS box 10 57

Links

Other MADS box family TFs
Other Colletotrichum orbiculare TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_78141 Agaricus bisporus AGABI2DRAFT_78141 N 0.000
DICSQDRAFT_137077 Dichomitus squalens DICSQDRAFT_137077 N 0.000
GALMADRAFT_158573 Galerina marginata GALMADRAFT_158573 N 0.000
gw1.9.705.1 Heterobasidion annosum gw1.9.705.1 N 0.000
HETIRDRAFT_239108 Heterobasidion irregulare HETIRDRAFT_239108 N 0.000
Moror_3852 Moniliophthora roreri Moror_3852 N 0.000
PISMIDRAFT_116994 Pisolithus microcarpus PISMIDRAFT_116994 N 0.000
PLEOSDRAFT_1107661 Pleurotus ostreatus PLEOSDRAFT_1107661 N 0.000
PLICRDRAFT_45561 Plicaturopsis crispa PLICRDRAFT_45561 N 0.000