CPIJ008336 (Culex quinquefasciatus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 CPIJ008336 T253526_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bs
M03915_2.00 		Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN		 SELEX
Nitta et al.(2015)
bs_1 		0.852 0.852
bs
M03916_2.00 		Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN		 SELEX
Nitta et al.(2015)
bs_2 		0.852 0.852
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.815 0.815
unc-120
M00684_2.00 		Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG		 PBM
Narasimhan et al.(2015)
pTH10822 		0.815 0.815
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.815 0.815
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.815 0.815
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.815 0.815
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.815 0.815
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.815 0.815
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.815 0.815
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.815 0.815
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.815 0.815
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.815 0.815
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.815 0.815
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.815 0.815
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.815 0.815
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.815 0.815
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.815 0.815
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.815 0.815
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.815 0.815
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.815 0.815
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.815 0.815
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.815 0.815
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.815 0.815
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.815 0.815
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPIJ008336-PA MADS box 266 292

Links

Other MADS box family TFs
Other Culex quinquefasciatus TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007988 Calypte anna Aan_R007988 N
ACEP14936 Atta cephalotes ACEP14936 N
ACEP21807 Atta cephalotes ACEP21807 N
Afo_R000495 Aptenodytes forsteri Afo_R000495 N
Alligator_sinensis_CCG000862.1 Alligator sinensis Alligator_sinensis_CCG000862.1 N
Brh_R013374 Buceros rhinoceros Brh_R013374 N
Cflo_02462--XP_391937.2_APIME Camponotus floridanus Cflo_02462--XP_391937.2_APIME N
Cmyd_10005570 Chelonia mydas Cmyd_10005570 N
CPIJ006378 Culex quinquefasciatus CPIJ006378 N
CpipJ_CPIJ006378 Culex pipiens CpipJ_CPIJ006378 N
ENSAMEG00000018716 Ailuropoda melanoleuca ENSAMEG00000018716 N
ENSAMXG00000020327 Astyanax mexicanus ENSAMXG00000020327 N
ENSAPLG00000000714 Anas platyrhynchos ENSAPLG00000000714 N
NPAS1 Bos taurus ENSBTAG00000015576 N
NPAS1 Canis familiaris ENSCAFG00000032405 N
NPAS3 Choloepus hoffmanni ENSCHOG00000013756 N
NPAS3 Callithrix jacchus ENSCJAG00000005437 N
NPAS1 Callithrix jacchus ENSCJAG00000011666 N
NPAS3 Cavia porcellus ENSCPOG00000006976 N
NPAS1 Cavia porcellus ENSCPOG00000023069 N
ENSCSAG00000003006 Chlorocebus sabaeus ENSCSAG00000003006 N
npas1 Danio rerio ENSDARG00000015876 N
NPAS1 Dasypus novemcinctus ENSDNOG00000035321 N
Npas3 Dipodomys ordii ENSDORG00000000860 N
ENSECAG00000004630 Equus caballus ENSECAG00000004630 N
NPAS3 Erinaceus europaeus ENSEEUG00000006528 N
NPAS3 Echinops telfairi ENSETEG00000016603 N
NPAS1 Felis catus ENSFCAG00000004833 N
NPAS1 Homo sapiens ENSG00000130751 N
NPAS3 Homo sapiens ENSG00000151322 N
npas1 Gasterosteus aculeatus ENSGACG00000009494 N
NPAS3 Gallus gallus ENSGALG00000029022 N
NPAS1 Gorilla gorilla ENSGGOG00000013398 N
NPAS3 Gorilla gorilla ENSGGOG00000022941 N
ENSGMOG00000016149 Gadus morhua ENSGMOG00000016149 N
ENSLACG00000001145 Latimeria chalumnae ENSLACG00000001145 N
NPAS3 Loxodonta africana ENSLAFG00000007169 N
ENSLOCG00000009512 Lepisosteus oculatus ENSLOCG00000009512 N
ENSLOCG00000014899 Lepisosteus oculatus ENSLOCG00000014899 N
ENSMEUG00000000606 Macropus eugenii ENSMEUG00000000606 N
ENSMEUG00000012966 Macropus eugenii ENSMEUG00000012966 N
ENSMGAG00000016559 Meleagris gallopavo ENSMGAG00000016559 N
NPAS1 Microcebus murinus ENSMICG00000006346 N
NPAS1 Macaca mulatta ENSMMUG00000011330 N
NPAS3 Macaca mulatta ENSMMUG00000014839 N
NPAS1 Monodelphis domestica ENSMODG00000009053 N
ENSMODG00000024103 Monodelphis domestica ENSMODG00000024103 N
ENSMPUG00000001046 Mustela putorius furo ENSMPUG00000001046 N
ENSMPUG00000005118 Mustela putorius furo ENSMPUG00000005118 N
Npas1 Mus musculus ENSMUSG00000001988 N
Npas3 Mus musculus ENSMUSG00000021010 N
ENSNLEG00000002946 Nomascus leucogenys ENSNLEG00000002946 N
ENSNLEG00000003239 Nomascus leucogenys ENSNLEG00000003239 N
ENSOANG00000014043 Ornithorhynchus anatinus ENSOANG00000014043 N
ENSOARG00000010869 Ovis aries ENSOARG00000010869 N
NPAS1 Otolemur garnettii ENSOGAG00000012829 N
NPAS3 Otolemur garnettii ENSOGAG00000014886 N
NPAS3 Ochotona princeps ENSOPRG00000008184 N
NPAS1 Ochotona princeps ENSOPRG00000014860 N
ENSORLG00000006931 Oryzias latipes ENSORLG00000006931 N
ENSP00000348460 Macaca fascicularis ENSP00000348460 N
ENSP00000348460-D1 Bos grunniens ENSP00000348460-D1 N
ENSP00000405290 Macaca fascicularis ENSP00000405290 N
ENSPANG00000014704 Papio anubis ENSPANG00000014704 N
ENSPCAG00000000784 Procavia capensis ENSPCAG00000000784 N
NPAS3 Procavia capensis ENSPCAG00000007391 N
ENSPFOG00000008940 Poecilia formosa ENSPFOG00000008940 N
ENSPMAG00000007632 Petromyzon marinus ENSPMAG00000007632 N
ENSPPYG00000010165 Pongo abelii ENSPPYG00000010165 N
ENSPSIG00000017052 Pelodiscus sinensis ENSPSIG00000017052 N
NPAS3 Pan troglodytes ENSPTRG00000006249 N
NPAS1 Pan troglodytes ENSPTRG00000011199 N
Npas1 Rattus norvegicus ENSRNOG00000015376 N
NPAS3 Sorex araneus ENSSARG00000003164 N
ENSSARG00000014127 Sorex araneus ENSSARG00000014127 N
ENSSHAG00000011475 Sarcophilus harrisii ENSSHAG00000011475 N
NPAS1 Sus scrofa ENSSSCG00000003108 N
ENSSSCG00000024473 Sus scrofa ENSSSCG00000024473 N
ENSSTOG00000003396 Ictidomys tridecemlineatus ENSSTOG00000003396 N
ENSSTOG00000014736 Ictidomys tridecemlineatus ENSSTOG00000014736 N
NPAS3 Tupaia belangeri ENSTBEG00000016041 N
ENSTGUG00000011911 Taeniopygia guttata ENSTGUG00000011911 N
npas1 Takifugu rubripes ENSTRUG00000012318 N
NPAS3 Tursiops truncatus ENSTTRG00000003266 N
NPAS1 Tursiops truncatus ENSTTRG00000011416 N
NPAS3 Vicugna pacos ENSVPAG00000001108 N
ENSXMAG00000004213 Xiphophorus maculatus ENSXMAG00000004213 N
Gfo_R012966 Geospiza fortis Gfo_R012966 N
HelroG63031 Helobdella robusta HelroG63031 N
Hsal_10736--XP_391937.2_APIME Harpegnathos saltator Hsal_10736--XP_391937.2_APIME N
L798_01241 Zootermopsis nevadensis L798_01241 N
LCUP010821 Lucilia cuprina LCUP010821 N
LDEC011477 Leptinotarsa decemlineata LDEC011477 N
MDOA009035 Musca domestica MDOA009035 N
NEMVEDRAFT_v1g96877 Nematostella vectensis NEMVEDRAFT_v1g96877 N
NV13641 Nasonia vitripennis NV13641 N
PHUM613040 Pediculus humanus PHUM613040 N
Pvit_04747 Pogona vitticeps Pvit_04747 N
Sakowv30006415m.g Saccoglossus kowalevskii Sakowv30006415m.g N
SPU_014249 Strongylocentrotus purpuratus SPU_014249 N
Tal_R006980 Tyto alba Tal_R006980 N
TC001448 Tribolium castaneum TC001448 N
npas3 Xenopus tropicalis XB-GENE-999791 N