MEF2C (Loxodonta africana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ENSLAFG00000013761 T253694_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MEF2C
M02745_2.00 		Homo sapiens
TWCTAWAAATAG
CTATTTWTAGWA		 SELEX
Jolma et al.(2010)
MEF2C_dimer 		0.891 0.891
MEF2C
M05551_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2C_FL_HT-SELEX 		0.891 0.891
MEF2C
M08149_2.00 		Homo sapiens
NDDMYAAAAATAGMH
DKCTATTTTTRKHHN		 ChIP-seq
Mathelier et al.(2014)
MA0497.1 		1.000 1.000
MEF2C
M07980_2.00 		Homo sapiens
NDDYYAAAAATAGHH
DDCTATTTTTRRHHN		 ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2C_HudsonAlpha 		1.000 1.000
MEF2C
M09248_2.00 		Homo sapiens
DYYAAAAATARMH
DKYTATTTTTRRH		 Misc
Kulakovskiy et al.(2013)
MEF2C_HUMAN.H11MO.0.A 		0.891 0.891
Mef2c
M09253_2.00 		Mus musculus
DDMYAAAAATAGMHN
NDKCTATTTTTRKHH		 Misc
Kulakovskiy et al.(2013)
MEF2C_MOUSE.H11MO.0.A 		0.891 0.891
MEF2C
M09597_2.00 		Homo sapiens
DHYWDAAATARM
KYTATTTHWRDH		 Misc
Heinz et al.(2010)
GM12878-Mef2c_GSE32465 		1.000 1.000
MEF2C
M10945_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2C_02 		1.000 1.000
MEF2C
M10946_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2C_Q4 		1.000 1.000
MEF2C
M05552_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2C_FL_Methyl-HT-SELEX 		1.000 1.000
MEF2A
M03340_2.00 		Homo sapiens
KCTAWAAATAGM
KCTATTTWTAGM		 SELEX
Jolma et al.(2013)
MEF2A_1 		0.979 0.979
MEF2A
M07979_2.00 		Homo sapiens
NDDHYAAAAATARHH
DDYTATTTTTRDHHN		 ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2A_HudsonAlpha 		0.979 0.979
MEF2A
M08212_2.00 		Homo sapiens
CTAWWWWTAG
CTAWWWWTAG		 ChIP-seq
Contrino et al.(2012)
Mv88 		0.870 0.870
MEF2A
M08213_2.00 		Homo sapiens
AAAATAGM
KCTATTTT		 ChIP-seq
Contrino et al.(2012)
Mv90 		0.870 0.870
MEF2A
M09247_2.00 		Homo sapiens
DYYAAAAATAGMH
DKCTATTTTTRRH		 Misc
Kulakovskiy et al.(2013)
MEF2A_HUMAN.H11MO.0.A 		0.979 0.979
Mef2a
M09255_2.00 		Mus musculus
DDCYAWAAATARMH
DKYTATTTWTRGHH		 Misc
Kulakovskiy et al.(2013)
MEF2A_MOUSE.H11MO.0.A 		0.979 0.979
Mef2a
M09599_2.00 		Mus musculus
CYNDAAATAG
CTATTTHNRG		 Misc
Heinz et al.(2010)
HL1-Mef2a.biotin_GSE21529 		0.979 0.979
MEF2A
M10933_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AMEF2_Q6 		0.870 0.870
MEF2A
M10934_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMEF2_Q6 		0.870 0.870
MEF2A
M10935_2.00 		Homo sapiens
BTCTAAAAATAACYCY
RGRGTTATTTTTAGAV		 Transfac
Matys et al.(2006)
V$MEF2_01 		0.979 0.979
MEF2A
M10936_2.00 		Homo sapiens
BNNNDDDCTAWAAATAGMHNNN
NNNDKCTATTTWTAGHHHNNNV		 Transfac
Matys et al.(2006)
V$MEF2_02 		0.979 0.979
MEF2A
M10937_2.00 		Homo sapiens
NNNNDWKCTAWAAATAGMHHNN
NNDDKCTATTTWTAGMWHNNNN		 Transfac
Matys et al.(2006)
V$MEF2_03 		0.979 0.979
MEF2A
M10938_2.00 		Homo sapiens
NVTGTTRCTAWAAATAGAAHHN
NDDWTCTATTTWTAGYAACABN		 Transfac
Matys et al.(2006)
V$MEF2_04 		0.979 0.979
MEF2A
M10939_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2A_05 		0.979 0.979
MEF2A
M10940_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2A_Q6 		0.979 0.979
MEF2A
M10941_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2_Q6_02 		0.979 0.979
MEF2A
M10942_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MMEF2_Q6 		0.870 0.870
MEF2A
M10943_2.00 		Homo sapiens
NDKCTAWAAATAGMHH
DDKCTATTTWTAGMHN		 Transfac
Matys et al.(2006)
V$RSRFC4_01 		0.870 0.870
MEF2A
M10944_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RSRFC4_Q2 		0.979 0.979
MEF2B
M03344_2.00 		Homo sapiens
RCTAWAAATAGM
KCTATTTWTAGY		 SELEX
Jolma et al.(2013)
MEF2B_1 		0.848 0.848
MEF2D
M03343_2.00 		Homo sapiens
DCTAWAAATAGM
KCTATTTWTAGH		 SELEX
Jolma et al.(2013)
MEF2D_1 		0.938 0.938
MEF2D
M05555_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2D_eDBD_HT-SELEX 		0.938 0.938
MEF2B
M05557_2.00 		Homo sapiens
CYNDWWWHGG
CCDWWWHNRG		 SELEX
Yin et al.(2017)
MEF2B_eDBD_HT-SELEX 		0.848 0.848
MEF2D
M09250_2.00 		Homo sapiens
CTAWAAATAGMH
DKCTATTTWTAG		 Misc
Kulakovskiy et al.(2013)
MEF2D_HUMAN.H11MO.0.A 		0.938 0.938
Mef2d
M09252_2.00 		Mus musculus
DDCTAWAAATAGMH
DKCTATTTWTAGHH		 Misc
Kulakovskiy et al.(2013)
MEF2D_MOUSE.H11MO.0.A 		0.938 0.938
MEF2B
M05559_2.00 		Homo sapiens
CCVDWTATGGTAACA
TGTTACCATAWHBGG		 SELEX
Yin et al.(2017)
MEF2B_FL_HT-SELEX 		0.848 0.848
MEF2D
M10957_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2D_Q4 		0.938 0.938
MEF2D
M05556_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2D_eDBD_Methyl-HT-SELEX 		0.938 0.938
MEF2B
M09251_2.00 		Homo sapiens
CYWAAAATAGHHHH
DDDDCTATTTTWRG		 Misc
Kulakovskiy et al.(2013)
MEF2B_HUMAN.H11MO.0.A 		0.848 0.848
MEF2B
M05558_2.00 		Homo sapiens
CYWWWWWNGG
CCNWWWWWRG		 SELEX
Yin et al.(2017)
MEF2B_eDBD_Methyl-HT-SELEX 		0.848 0.848
MEF2B
M05560_2.00 		Homo sapiens
CCVDATATGGTAACR
YGTTACCATATHBGG		 SELEX
Yin et al.(2017)
MEF2B_FL_Methyl-HT-SELEX 		0.848 0.848
Mef2
M08214_2.00 		Drosophila melanogaster
YTAWWWWTAR
YTAWWWWTAR		 ChIP-seq
Contrino et al.(2012)
Mf26 		0.875 0.875
Mef2b
M10958_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2B_02 		0.804 0.804
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000011521 MADS box 12 57
ENSLAFP00000023768 MADS box 10 57

Links

Other MADS box family TFs
Other Loxodonta africana TFs

506 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_00991 Exophiala aquamarina A1O9_00991 N 0.000
A1O9_07021 Exophiala aquamarina A1O9_07021 N 0.000
ACRE_069230 Acremonium chrysogenum ACRE_069230 N 0.000
BBA_07453 Beauveria bassiana BBA_07453 N 0.000
BBA_08510 Beauveria bassiana BBA_08510 N 0.000
CADANGAG00006610 Aspergillus niger CADANGAG00006610 N 0.000
CADANGAG00012412 Aspergillus niger CADANGAG00012412 N 0.000
ATEG_04692 Aspergillus terreus CADATEAG00010210 N 0.000
CCM_04496 Cordyceps militaris CCM_04496 N 0.000
CGGC5_11092 Colletotrichum gloeosporioides CGGC5_11092 N 0.000
CPUR_08234 Claviceps purpurea CPUR_08234 N 0.000
e_gw1.00815.93.1 Aspergillus carbonarius e_gw1.00815.93.1 N 0.000
gw1.00083.300.1 Aspergillus carbonarius gw1.00083.300.1 N 0.000
M437DRAFT_47167 Aureobasidium melanogenum M437DRAFT_47167 N 0.000
MANI_026073 Metarhizium anisopliae MANI_026073 N 0.000
PODANS_3_4320 Podospora anserina PODANS_3_4320 N 0.000
PV08_06958 Exophiala spinifera PV08_06958 N 0.000
PVAR5_1141 Byssochlamys spectabilis PVAR5_1141 N 0.000
S40288_08276 Stachybotrys chartarum S40288_08276 N 0.000
VHEMI08510 Torrubiella hemipterigena VHEMI08510 N 0.000
Z517_00801 Fonsecaea pedrosoi Z517_00801 N 0.000