GLYMA04G43640 (Glycine max)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GLYMA04G43640 T254109_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AG
M02695_2.00
Arabidopsis thaliana
HTTWCCWWAWNDGGHADN

NHTDCCHNWTWWGGWAAD
SELEX
Mathelier et al.(2014)
MA0005.2
0.979 0.979
AG
M10923_2.00
Arabidopsis thaliana
HTTWCCWWAWNDGGHWDN

NHTDCCHNWTWWGGWAAD
Transfac
Matys et al.(2006)
P$AG_01
0.979 0.979
AG
M10924_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG_02
0.979 0.979
AG
M10925_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG_03
0.979 0.979
AG_TOBAC
M10995_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG1_02
0.979 0.979
AG
M10926_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG_Q2
0.979 0.979
Q08711_PETHY
M10999_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP6_01
0.979 0.979
MADS3_ORYSJ
M10963_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_01
0.979 0.979
AG_PETHY
M10994_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_02
0.979 0.979
Q8VWZ3_MALDO
M11025_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS14_02
0.958 0.958
Q8VWZ2_MALDO
M11024_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS15_02
0.958 0.958
O82698_MALDO
M11021_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS10_01
0.938 0.938
AGL1
M02694_2.00
Arabidopsis thaliana
NDTDCCWWWWNDGGWAHN

NDTWCCHNWWWWGGHAHN
SELEX
Mathelier et al.(2014)
MA0585.1
0.917 0.917
AGL1
M10920_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL1_01
0.917 0.917
AGL1
M10921_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL1_02
0.917 0.917
SHP2
M10914_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SHP2_01
0.917 0.917
Q40882_PETHY
M11003_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP11_01
0.896 0.896
SEP2
M10916_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL4_01
0.875 0.875
Q43616_PETHY
M11004_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP7_01
0.875 0.875
AGL6
M06986_2.00
Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW

WWNTTWCYWTTTTDGGWAA
Dap-seq
OMalley et al.(2016)
AGL6_col_a
0.854 0.854
Q9LEH9_HORVU
M10983_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM9_01
0.854 0.854
Q9ATF1_PETHY
M11013_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP9_01
0.854 0.854
O82699_MALDO
M11022_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS11_01
0.854 0.854
MAD17_ORYSJ
M10961_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS17_01
0.854 0.854
Q9ST54_MALDO
M11029_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_04
0.854 0.854
MADS6
M10967_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS6_01
0.854 0.854
O82697_MALDO
M11020_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS7_01
0.854 0.854
SEP1
M02696_2.00
Arabidopsis thaliana
NDWNCCAWWWWTRGHAWB

VWTDCYAWWWWTGGNWHN
SELEX
Mathelier et al.(2014)
MA0584.1
0.833 0.833
SEP3
M08143_2.00
Arabidopsis thaliana
CCAAAAAWRGN

NCYWTTTTTGG
ChIP-seq
Mathelier et al.(2014)
MA0563.1
0.833 0.833
SEP1
M10929_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL2_01
0.833 0.833
SEP1
M10930_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL2_02
0.833 0.833
SEP3
M10902_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL9_01
0.833 0.833
AGL9_PETHY
M10993_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP2_01
0.833 0.833
Q9ATE6_PETHY
M11009_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP23_01
0.833 0.833
Q9ATE3_PETHY
M11008_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP28_01
0.833 0.833
Q9ATF3_PETHY
M11015_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP4_01
0.833 0.833
O82084_MALDO
M11018_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_01
0.833 0.833
Q6UGQ8_PETHY
M11005_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS12_01
0.833 0.833
Q9LM09_TOBAC
M11016_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS4_01
0.833 0.833
MADS50
M10968_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS50_01
0.833 0.833
MADS7
M10975_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS7_02
0.833 0.833
MADS8
M10976_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS8_01
0.833 0.833
Q9SBA6_MALDO
M11028_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS8_02
0.833 0.833
AGL42
M06995_2.00
Arabidopsis thaliana
RATGATG

CATCATY
Dap-seq
OMalley et al.(2016)
AGL42_col_a
0.812 0.812
SOC1
M08425_2.00
Arabidopsis thaliana
CCAAAAAWRGAAAND

HNTTTCYWTTTTTGG
ChIP-chip
Mathelier et al.(2014)
MA0554.1
0.812 0.812
SOC1
M10915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL20_01
0.812 0.812
MADS5
M10970_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS5_02
0.812 0.812
Solyc05g012020.2
M10986_2.00
Solanum lycopersicum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_01
0.812 0.812
Solyc05g012020.2
M10987_2.00
Solanum lycopersicum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_Q2_01
0.812 0.812
Solyc05g012020.2
M10988_2.00
Solanum lycopersicum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_Q2
0.812 0.812
squamosa
M02697_2.00
Antirrhinum majus
MYAWAWAWRGHAAN

NTTDCYWTWTWTRK
SELEX
Mathelier et al.(2014)
MA0082.1
0.792 0.792
AGL3
M02693_2.00
Arabidopsis thaliana
VDWNCCAWWWWWRGNWNN

NNWNCYWWWWWTGGNWHB
SELEX
Mathelier et al.(2014)
MA0001.2
0.792 0.792
AGL3
M10908_2.00
Arabidopsis thaliana
VDWNCCAWWWWWRGNWNN

NNWNCYWWWWWTGGNWHB
Transfac
Matys et al.(2006)
P$AGL3_01
0.792 0.792
AGL3
M10909_2.00
Arabidopsis thaliana
NDTNCCAWWWWTRGHWNN

NNWDCYAWWWWTGGNAHN
Transfac
Matys et al.(2006)
P$AGL3_02
0.792 0.792
AGL3
M10910_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL3_03
0.792 0.792
Q9LEI3_HORVU
M10985_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM3_01
0.792 0.792
Q9LEI1_HORVU
M10984_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM7_01
0.792 0.792
MLOC_61901
M10964_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM8_01
0.792 0.792
Q9ATE8_PETHY
M11011_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP21_01
0.792 0.792
Q9ATE7_PETHY
M11010_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP22_01
0.792 0.792
Q9ATF2_PETHY
M11014_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP5_01
0.792 0.792
MADS1
M10969_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_02
0.792 0.792
Q40591_TOBAC
M11002_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_03
0.792 0.792
MADS15
M10972_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS15_01
0.792 0.792
Q9FR84_MAIZE
M10981_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_03
0.792 0.792
Q38742_ANTMA
M11000_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SQUA_01
0.792 0.792
Q41829_MAIZE
M10977_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_02
0.792 0.792
AGL13
M06989_2.00
Arabidopsis thaliana
WTWCYHAAAAWRGWAADW

WHTTWCYWTTTTDRGWAW
Dap-seq
OMalley et al.(2016)
AGL13_col_b
0.771 0.771
Q8GT99_TOBAC
M11006_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS11_02
0.771 0.771
MAD14_ORYSJ
M10960_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS14_01
0.771 0.771
MADS18
M10973_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS18_01
0.771 0.771
Q9SBQ1_PETHY
M11017_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PFG_01
0.771 0.771
AGL15
M06992_2.00
Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN

NTTTCYWHWTTDGGWAANW
Dap-seq
OMalley et al.(2016)
AGL15_col_a
0.750 0.750
AGL15
M06993_2.00
Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH

DDNTTTCYHHWTTDGGWAANH
Dap-seq
OMalley et al.(2016)
AGL15_colamp_a
0.750 0.750
AP1
M08144_2.00
Arabidopsis thaliana
MYAAAAAWRGAAA

TTTCYWTTTTTRK
ChIP-seq
Mathelier et al.(2014)
MA0940.1
0.750 0.750
AGL15
M10927_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_01
0.750 0.750
AGL15
M10928_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_02
0.750 0.750
Q9ATE9_PETHY
M11012_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP20_01
0.750 0.750
O82695_MALDO
M11019_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS5_01
0.750 0.750
AP1
M10905_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSA_Q2
0.750 0.750
Q84LI3_WHEAT
M10979_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT1_01
0.750 0.750
O82128_WHEAT
M10965_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WAP1_01
0.750 0.750
AGL16
M06987_2.00
Arabidopsis thaliana
TWCCHAAWDDGGWAA

TTWCCHHWTTDGGWA
Dap-seq
OMalley et al.(2016)
AGL16_col_a
0.729 0.729
AGL16
M06988_2.00
Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS

STTTCCHWWTWDGGWAANWHW
Dap-seq
OMalley et al.(2016)
AGL16_colamp_a
0.729 0.729
AP3
M08146_2.00
Arabidopsis thaliana
WDCCMAAARWRGHAA

TTDCYWYTTTKGGHW
ChIP-seq
Mathelier et al.(2014)
MA0556.1
0.729 0.729
FBP24_PETHY
M10997_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP24_01
0.729 0.729
Q9ATE2_PETHY
M11007_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP29_01
0.729 0.729
Q7X9I6_MALDO
M11023_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS12_02
0.729 0.729
MADS2
M10966_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_02
0.729 0.729
Q9FVN1_MAIZE
M10982_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_03
0.729 0.729
Q9ZRA5_MALDO
M11030_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_04
0.729 0.729
AP3
M10919_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSB_Q2
0.729 0.729
Q40513_TOBAC
M11001_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DEF_01
0.708 0.708
M17_MAIZE
M10959_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M17_01
0.708 0.708
Q9AR49_MAIZE
M10980_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M29_01
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA04G43640.2 MADS box 10 57
GLYMA04G43640.4 MADS box 10 57
GLYMA04G43640.5 MADS box 10 57
GLYMA04G43640.6 MADS box 10 57

Links

Other MADS box family TFs
Other Glycine max TFs

1826 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R002403 Calypte anna Aan_R002403 N 0.000
Alligator_sinensis_CCG001820.1 Alligator sinensis Alligator_sinensis_CCG001820.1 N 0.000
Cmyd_10005054 Chelonia mydas Cmyd_10005054 N 0.000
GATAD2B Anolis carolinensis ENSACAG00000008791 N 0.000
ENSAMEG00000012036 Ailuropoda melanoleuca ENSAMEG00000012036 N 0.000
ENSAMXG00000001813 Astyanax mexicanus ENSAMXG00000001813 N 0.000
ENSAMXG00000014687 Astyanax mexicanus ENSAMXG00000014687 N 0.000
ENSAPLG00000011761 Anas platyrhynchos ENSAPLG00000011761 N 0.000
GATAD2B Bos taurus ENSBTAG00000006678 N 0.000
ENSBTAP00000008766-D1 Bos grunniens ENSBTAP00000008766-D1 N 0.000
GATAD2B Canis familiaris ENSCAFG00000017433 N 0.000
GATAD2B Choloepus hoffmanni ENSCHOG00000013411 N 0.000
GATAD2B Callithrix jacchus ENSCJAG00000010131 N 0.000
GATAD2B Cavia porcellus ENSCPOG00000010326 N 0.000
ENSCSAG00000001881 Chlorocebus sabaeus ENSCSAG00000001881 N 0.000
gatad2b Danio rerio ENSDARG00000005834 N 0.000
GATAD2B Dasypus novemcinctus ENSDNOG00000048326 N 0.000
Gatad2b Dipodomys ordii ENSDORG00000013431 N 0.000
GATAD2B Equus caballus ENSECAG00000011357 N 0.000
GATAD2B Felis catus ENSFCAG00000002751 N 0.000
gatad2b Gasterosteus aculeatus ENSGACG00000000510 N 0.000
ENSGALG00000029154 Gallus gallus ENSGALG00000029154 N 0.000
GATAD2B Gorilla gorilla ENSGGOG00000012553 N 0.000
ENSGMOG00000013793 Gadus morhua ENSGMOG00000013793 N 0.000
ENSLACG00000013888 Latimeria chalumnae ENSLACG00000013888 N 0.000
GATAD2B Loxodonta africana ENSLAFG00000002667 N 0.000
ENSLOCG00000008705 Lepisosteus oculatus ENSLOCG00000008705 N 0.000
ENSMEUG00000007551 Macropus eugenii ENSMEUG00000007551 N 0.000
ENSMGAG00000017205 Meleagris gallopavo ENSMGAG00000017205 N 0.000
GATAD2B Microcebus murinus ENSMICG00000008874 N 0.000
GATAD2B Myotis lucifugus ENSMLUG00000004859 N 0.000
GATAD2B Macaca mulatta ENSMMUG00000002696 N 0.000
GATAD2B Monodelphis domestica ENSMODG00000017336 N 0.000
ENSMPUG00000008136 Mustela putorius furo ENSMPUG00000008136 N 0.000
Gatad2b Mus musculus ENSMUSG00000042390 N 0.000
ENSNLEG00000010649 Nomascus leucogenys ENSNLEG00000010649 N 0.000
ENSOARG00000001486 Ovis aries ENSOARG00000001486 N 0.000
GATAD2B Oryctolagus cuniculus ENSOCUG00000008135 N 0.000
GATAD2B Otolemur garnettii ENSOGAG00000004606 N 0.000
ENSONIG00000010369 Oreochromis niloticus ENSONIG00000010369 N 0.000
GATAD2B Ochotona princeps ENSOPRG00000000027 N 0.000
gatad2b Oryzias latipes ENSORLG00000010868 N 0.000
ENSP00000357644 Macaca fascicularis ENSP00000357644 N 0.000
ENSPANG00000008972 Papio anubis ENSPANG00000008972 N 0.000
GATAD2B Procavia capensis ENSPCAG00000001797 N 0.000
ENSPFOG00000008182 Poecilia formosa ENSPFOG00000008182 N 0.000
ENSPPYG00000029612 Pongo abelii ENSPPYG00000029612 N 0.000
ENSPSIG00000004590 Pelodiscus sinensis ENSPSIG00000004590 N 0.000
GATAD2B Pan troglodytes ENSPTRG00000001364 N 0.000
GATAD2B Pteropus vampyrus ENSPVAG00000011082 N 0.000
Gatad2b Rattus norvegicus ENSRNOG00000015553 N 0.000
GATAD2B Sorex araneus ENSSARG00000011365 N 0.000
ENSSHAG00000011064 Sarcophilus harrisii ENSSHAG00000011064 N 0.000
GATAD2B Sus scrofa ENSSSCG00000006562 N 0.000
ENSSTOG00000005407 Ictidomys tridecemlineatus ENSSTOG00000005407 N 0.000
GATAD2B Tupaia belangeri ENSTBEG00000015791 N 0.000
gatad2b Tetraodon nigroviridis ENSTNIG00000002290 N 0.000
gatad2b Takifugu rubripes ENSTRUG00000002877 N 0.000
ENSTSYG00000012560 Tarsius syrichta ENSTSYG00000012560 N 0.000
GATAD2B Tursiops truncatus ENSTTRG00000014779 N 0.000
GATAD2B Vicugna pacos ENSVPAG00000010268 N 0.000
ENSXMAG00000010412 Xiphophorus maculatus ENSXMAG00000010412 N 0.000
Gfo_R009850 Geospiza fortis Gfo_R009850 N 0.000
Myotis_brandtii_GATAD2B_10031899 Myotis brandtii Myotis_brandtii_GATAD2B_10031899 N 0.000
Ogr01497 Ophisaurus gracilis Ogr01497 N 0.000
Pvit_02350 Pogona vitticeps Pvit_02350 N 0.000
gatad2b Xenopus tropicalis XB-GENE-5995517 N 0.000