GRMZM2G137387 (Zea mays)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GRMZM2G137387 T254301_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL42
M06995_2.00 		Arabidopsis thaliana
RATGATG
CATCATY		 Dap-seq
OMalley et al.(2016)
AGL42_col_a 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G137387_P01 MADS box 223 270

Links

Other MADS box family TFs
Other Zea mays TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC233912.1_FG001 Zea mays AC233912.1_FG001 I 0.958
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.729
AMTR_s00002p00262770 Amborella trichopoda AMTR_s00002p00262770 I 0.729
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.708
Aquca_022_00241 Aquilegia coerulea Aquca_022_00241 I 0.708
AGL72 Arabidopsis thaliana AT5G51860 I 0.708
AGL71 Arabidopsis thaliana AT5G51870 I 0.729
AGL42 Arabidopsis thaliana AT5G62165 D 0.708
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.700
BGIOSGA017110 Oryza indica BGIOSGA017110 I 0.854
Bo3g023570 Brassica oleracea Bo3g023570 I 0.708
Bo9g103660 Brassica oleracea Bo9g103660 I 0.708
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.729
Bostr.26833s0022 Boechera stricta Bostr.26833s0022 I 0.729
Bra028282 Brassica rapa Bra028282 I 0.708
Bra028283 Brassica rapa Bra028283 I 0.708
Bra029154 Brassica rapa Bra029154 I 0.708
Bra029155 Brassica rapa Bra029155 I 0.708
BRADI3G05260 Brachypodium distachyon BRADI3G05260 I 0.708
BRADI5G21700 Brachypodium distachyon BRADI5G21700 I 0.833
Cagra.0277s0030 Capsella grandiflora Cagra.0277s0030 I 0.729
Cagra.4003s0006 Capsella grandiflora Cagra.4003s0006 I 0.708
Carubv10026982m.g Capsella rubella Carubv10026982m.g I 0.750
Carubv10027093m.g Capsella rubella Carubv10027093m.g I 0.729
Carubv10027142m.g Capsella rubella Carubv10027142m.g I 0.708
Ca_19854 Cicer arietinum Ca_19854 I 0.708
F775_05654 Aegilops tauschii F775_05654 I 0.812
F775_30836 Aegilops tauschii F775_30836 I 0.708
GLYMA13G02170 Glycine max GLYMA13G02170 I 0.708
GLYMA14G34160 Glycine max GLYMA14G34160 I 0.708
GRMZM2G005155 Zea mays GRMZM2G005155 I 0.938
GRMZM2G128953 Zea mays GRMZM2G128953 I 0.958
GRMZM2G135018 Zea mays GRMZM2G135018 I 0.938
GRMZM2G148220 Zea mays GRMZM2G148220 N 0.896
GRMZM2G446426 Zea mays GRMZM2G446426 N 0.958
GSMUA_Achr2G02660_001 Musa acuminata GSMUA_Achr2G02660_001 I 0.792
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.750
GSMUA_Achr5G01230_001 Musa acuminata GSMUA_Achr5G01230_001 I 0.708
GSMUA_Achr6G18670_001 Musa acuminata GSMUA_Achr6G18670_001 I 0.708
LPERR04G20730 Leersia perrieri LPERR04G20730 I 0.875
MDP0000268317 Malus domestica MDP0000268317 I 0.708
mgf025830m Mimulus guttatus mgf025830m I 0.708
MLOC_12133 Hordeum vulgare MLOC_12133 I 0.812
MLOC_65966 Hordeum vulgare MLOC_65966 I 0.708
OB04G32080 Oryza brachyantha OB04G32080 I 0.854
OBART04G25610 Oryza barthii OBART04G25610 I 0.854
OGLUM04G25090 Oryza glumaepatula OGLUM04G25090 I 0.854
OLONG_021245 Oryza longistaminata OLONG_021245 I 0.833
OLONG_023633 Oryza longistaminata OLONG_023633 I 0.711
OMERI04G20840 Oryza meridionalis OMERI04G20840 I 0.854
OPUNC04G22650 Oryza punctata OPUNC04G22650 I 0.854
ORGLA04G0222300 Oryza glaberrima ORGLA04G0222300 I 0.854
ORUFI04G26810 Oryza rufipogon ORUFI04G26810 I 0.854
MADS31 Oryza sativa OS04G0614100 I 0.854
Pavir.Da00991 Panicum virgatum Pavir.Da00991 I 0.708
Pavir.Ea03607 Panicum virgatum Pavir.Ea03607 I 0.708
Pavir.Ga00461 Panicum virgatum Pavir.Ga00461 I 0.938
Pavir.Gb00526 Panicum virgatum Pavir.Gb00526 I 0.917
Pavir.J09556 Panicum virgatum Pavir.J09556 I 0.708
Pm019404 Prunus mume Pm019404 I 0.708
PRUPE_ppa019267mg Prunus persica PRUPE_ppa019267mg I 0.708
Sb06g028420 Sorghum bicolor Sb06g028420 I 0.938
scaffold_801621.1 Arabidopsis lyrata scaffold_801621.1 I 0.708
SELMODRAFT_449545 Selaginella moellendorffii SELMODRAFT_449545 I 0.708
SELMODRAFT_449594 Selaginella moellendorffii SELMODRAFT_449594 I 0.708
Thhalv10004954m.g Eutrema salsugineum Thhalv10004954m.g I 0.708
Thhalv10014716m.g Eutrema salsugineum Thhalv10014716m.g I 0.708
Thhalv10015303m.g Eutrema salsugineum Thhalv10015303m.g I 0.729
Traes_2AL_8DF89AA72 Triticum aestivum Traes_2AL_8DF89AA72 I 0.812
Traes_2DL_6CD5A5CD9 Triticum aestivum Traes_2DL_6CD5A5CD9 I 0.812
Traes_6AS_57E50EE92 Triticum aestivum Traes_6AS_57E50EE92 I 0.708
Traes_6BS_5789476CB Triticum aestivum Traes_6BS_5789476CB I 0.708
Traes_6DS_9BBDCC9F7 Triticum aestivum Traes_6DS_9BBDCC9F7 I 0.708
TRIUR3_18402 Triticum urartu TRIUR3_18402 I 0.812
TRIUR3_26896 Triticum urartu TRIUR3_26896 I 0.708
TT16 Vitis vinifera VIT_01s0011g01560 I 0.729