OBART11G21780 (Oryza barthii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OBART11G21780 T255007_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART11G21780.1 MADS box 44 89
OBART11G21780.2 MADS box 44 89

Links

Other MADS box family TFs
Other Oryza barthii TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006348 Oryza indica BGIOSGA006348 I
BRADI3G44700 Brachypodium distachyon BRADI3G44700 I
CHLREDRAFT_122706 Chlamydomonas reinhardtii CHLREDRAFT_122706 I
evm.TU.supercontig_5.77 Carica papaya evm.TU.supercontig_5.77 I
e_gw1.25.66.1 Volvox carteri e_gw1.25.66.1 I
F775_04438 Aegilops tauschii F775_04438 I
F775_42298 Aegilops tauschii F775_42298 I
GRMZM2G059851 Zea mays GRMZM2G059851 I
GRMZM2G165972 Zea mays GRMZM2G165972 I
gw1.24.267.1 Chlorella NC64A gw1.24.267.1 I
LPERR02G15050 Leersia perrieri LPERR02G15050 I
MLOC_69675 Hordeum vulgare MLOC_69675 I
OBART02G18800 Oryza barthii OBART02G18800 I
OGLUM02G19090 Oryza glumaepatula OGLUM02G19090 I
OMERI02G18820 Oryza meridionalis OMERI02G18820 I
ONIVA02G20850 Oryza nivara ONIVA02G20850 I
OPUNC02G16840 Oryza punctata OPUNC02G16840 I
ORGLA02G0162000 Oryza glaberrima ORGLA02G0162000 I
ORUFI02G19790 Oryza rufipogon ORUFI02G19790 I
HSFA3 Oryza sativa OS02G0527300 I
Pavir.Ab01320 Panicum virgatum Pavir.Ab01320 I
PK22028.1 Cannabis sativa PK22028.1 I
Sb04g021490 Sorghum bicolor Sb04g021490 I
Si016943m.g Setaria italica Si016943m.g I
Traes_2AS_53BFA14C7 Triticum aestivum Traes_2AS_53BFA14C7 I
Traes_2BS_1484A7516 Triticum aestivum Traes_2BS_1484A7516 I
Traes_4DS_A980F512E Triticum aestivum Traes_4DS_A980F512E I