CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_003602
(
Oryza longistaminata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OLONG_003602
T255104_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_003602-R1
MADS box
9
28
AESAAARQVTFSKRRGGAIK
OLONG_003602-R1
MADS box
29
76
RIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDVALLMFSPSGRLSHF
Links
Other
MADS box
family TFs
Other
Oryza longistaminata
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA026745
Oryza indica
BGIOSGA026745
I
0.706
LPERR08G16000
Leersia perrieri
LPERR08G16000
I
0.706
OBART08G19110
Oryza barthii
OBART08G19110
I
0.706
OGLUM08G20110
Oryza glumaepatula
OGLUM08G20110
I
0.706
ORGLA08G0167200
Oryza glaberrima
ORGLA08G0167200
I
0.706
ORUFI08G21330
Oryza rufipogon
ORUFI08G21330
I
0.706
OS08G0494100
Oryza sativa
OS08G0494100
I
0.706