CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA04G08280
(
Oryza nivara
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ONIVA04G08280
T255248_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA04G08280.1
MADS box
11
60
RIEDRVRRGICFRKRLAGLEKKAEELAVLCDAHVGFVVLSCSDDDRLHHF
Links
Other
MADS box
family TFs
Other
Oryza nivara
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022425
Oryza indica
BGIOSGA022425
N
BRADI1G47562
Brachypodium distachyon
BRADI1G47562
N
LPERR06G04790
Leersia perrieri
LPERR06G04790
N
OBART06G05260
Oryza barthii
OBART06G05260
N
OGLUM06G05410
Oryza glumaepatula
OGLUM06G05410
N
OLONG_005462
Oryza longistaminata
OLONG_005462
N
OMERI06G06280
Oryza meridionalis
OMERI06G06280
N
OPUNC06G05020
Oryza punctata
OPUNC06G05020
N
ORUFI06G05310
Oryza rufipogon
ORUFI06G05310
N
Sb01g050320
Sorghum bicolor
Sb01g050320
N