CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS06G0667200
(
Oryza sativa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OS06G0667200
T255526_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
M17_MAIZE
M10959_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M17_01
0.750
0.750
Q9ATE9_PETHY
M11012_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP20_01
0.729
0.729
Q9ATE8_PETHY
M11011_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP21_01
0.729
0.729
Q40591_TOBAC
M11002_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_03
0.729
0.729
AGL15
M06992_2.00
Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN
NTTTCYWHWTTDGGWAANW
Dap-seq
OMalley et al.(2016)
AGL15_col_a
0.708
0.708
AGL15
M06993_2.00
Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH
DDNTTTCYHHWTTDGGWAANH
Dap-seq
OMalley et al.(2016)
AGL15_colamp_a
0.708
0.708
AP1
M08144_2.00
Arabidopsis thaliana
MYAAAAAWRGAAA
TTTCYWTTTTTRK
ChIP-seq
Mathelier et al.(2014)
MA0940.1
0.708
0.708
SOC1
M08425_2.00
Arabidopsis thaliana
CCAAAAAWRGAAAND
HNTTTCYWTTTTTGG
ChIP-chip
Mathelier et al.(2014)
MA0554.1
0.708
0.708
AGL15
M10927_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_01
0.708
0.708
AGL15
M10928_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_02
0.708
0.708
SOC1
M10915_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL20_01
0.708
0.708
FBP24_PETHY
M10997_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP24_01
0.708
0.708
Q9AR49_MAIZE
M10980_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M29_01
0.708
0.708
MADS2
M10966_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_02
0.708
0.708
MAD55_ORYSJ
M10962_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS55_01
0.708
0.708
AP1
M10905_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSA_Q2
0.708
0.708
Q4U0F1_WHEAT
M10978_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT2_01
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS06T0667200-00
MADS box
19
66
RIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDF
Links
Other
MADS box
family TFs
Other
Oryza sativa
TFs
265 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R013450
Aptenodytes forsteri
Afo_R013450
N
0.000
Alligator_sinensis_CCG022153.1
Alligator sinensis
Alligator_sinensis_CCG022153.1
N
0.000
Cmyd_10004958
Chelonia mydas
Cmyd_10004958
N
0.000
ENSACAG00000006811
Anolis carolinensis
ENSACAG00000006811
N
0.000
ENSAMEG00000000835
Ailuropoda melanoleuca
ENSAMEG00000000835
N
0.000
ENSAPLG00000006822
Anas platyrhynchos
ENSAPLG00000006822
N
0.000
ENSBTAG00000024657
Bos taurus
ENSBTAG00000024657
N
0.000
ENSCAFG00000007675
Canis familiaris
ENSCAFG00000007675
N
0.000
ENSCJAG00000008421
Callithrix jacchus
ENSCJAG00000008421
N
0.000
ENSCPOG00000011753
Cavia porcellus
ENSCPOG00000011753
N
0.000
ENSCSAG00000006026
Chlorocebus sabaeus
ENSCSAG00000006026
N
0.000
si:ch211-113e8.10
Danio rerio
ENSDARG00000079631
N
0.000
ENSDNOG00000043611
Dasypus novemcinctus
ENSDNOG00000043611
N
0.000
Zfp91
Dipodomys ordii
ENSDORG00000013985
N
0.000
ENSECAG00000002280
Equus caballus
ENSECAG00000002280
N
0.000
ENSEEUG00000002360
Erinaceus europaeus
ENSEEUG00000002360
N
0.000
ENSFALG00000010996
Ficedula albicollis
ENSFALG00000010996
N
0.000
ENSFCAG00000009945
Felis catus
ENSFCAG00000009945
N
0.000
ZFP91
Homo sapiens
ENSG00000186660
N
0.000
ENSGACG00000019434
Gasterosteus aculeatus
ENSGACG00000019434
N
0.000
ENSGALG00000007287
Gallus gallus
ENSGALG00000007287
N
0.000
ENSGGOG00000026119
Gorilla gorilla
ENSGGOG00000026119
N
0.000
ENSLAFG00000011508
Loxodonta africana
ENSLAFG00000011508
N
0.000
ENSLOCG00000007033
Lepisosteus oculatus
ENSLOCG00000007033
N
0.000
ENSMEUG00000006553
Macropus eugenii
ENSMEUG00000006553
N
0.000
ENSMGAG00000009741
Meleagris gallopavo
ENSMGAG00000009741
N
0.000
ENSMLUG00000009869
Myotis lucifugus
ENSMLUG00000009869
N
0.000
ENSMMUG00000011714
Macaca mulatta
ENSMMUG00000011714
N
0.000
ENSMODG00000020173
Monodelphis domestica
ENSMODG00000020173
N
0.000
ENSMPUG00000000298
Mustela putorius furo
ENSMPUG00000000298
N
0.000
Zfp91
Mus musculus
ENSMUSG00000024695
N
0.000
ENSNLEG00000013034
Nomascus leucogenys
ENSNLEG00000013034
N
0.000
ENSOANG00000004512
Ornithorhynchus anatinus
ENSOANG00000004512
N
0.000
ENSOARG00000003340
Ovis aries
ENSOARG00000003340
N
0.000
ENSOARG00000011184
Ovis aries
ENSOARG00000011184
N
0.000
ENSOCUG00000005385
Oryctolagus cuniculus
ENSOCUG00000005385
N
0.000
ENSOGAG00000032105
Otolemur garnettii
ENSOGAG00000032105
N
0.000
ENSONIG00000009063
Oreochromis niloticus
ENSONIG00000009063
N
0.000
ENSOPRG00000000311
Ochotona princeps
ENSOPRG00000000311
N
0.000
ENSORLG00000005855
Oryzias latipes
ENSORLG00000005855
N
0.000
ENSP00000339030
Macaca fascicularis
ENSP00000339030
N
0.000
ENSP00000339030-D1
Bos grunniens
ENSP00000339030-D1
N
0.000
ENSPANG00000010800
Papio anubis
ENSPANG00000010800
N
0.000
ENSPCAG00000011859
Procavia capensis
ENSPCAG00000011859
N
0.000
ENSPFOG00000007955
Poecilia formosa
ENSPFOG00000007955
N
0.000
ENSPPYG00000003246
Pongo abelii
ENSPPYG00000003246
N
0.000
ENSPSIG00000005217
Pelodiscus sinensis
ENSPSIG00000005217
N
0.000
ZFP91
Pan troglodytes
ENSPTRG00000029949
N
0.000
Zfp91
Rattus norvegicus
ENSRNOG00000012524
N
0.000
ENSSARG00000013155
Sorex araneus
ENSSARG00000013155
N
0.000
ENSSHAG00000006526
Sarcophilus harrisii
ENSSHAG00000006526
N
0.000
ENSSSCG00000013155
Sus scrofa
ENSSSCG00000013155
N
0.000
ENSTBEG00000011227
Tupaia belangeri
ENSTBEG00000011227
N
0.000
ENSTGUG00000007128
Taeniopygia guttata
ENSTGUG00000007128
N
0.000
ENSTNIG00000006126
Tetraodon nigroviridis
ENSTNIG00000006126
N
0.000
ENSTRUG00000001110
Takifugu rubripes
ENSTRUG00000001110
N
0.000
ENSTSYG00000010631
Tarsius syrichta
ENSTSYG00000010631
N
0.000
ENSVPAG00000006317
Vicugna pacos
ENSVPAG00000006317
N
0.000
ENSXMAG00000009884
Xiphophorus maculatus
ENSXMAG00000009884
N
0.000
Gfo_R011905
Geospiza fortis
Gfo_R011905
N
0.000
Myotis_brandtii_ZFP91_10002181
Myotis brandtii
Myotis_brandtii_ZFP91_10002181
N
0.000
Ogr13692
Ophisaurus gracilis
Ogr13692
N
0.000
Pvit_00119
Pogona vitticeps
Pvit_00119
N
0.000
Tal_R001381
Tyto alba
Tal_R001381
N
0.000
zfp91
Xenopus tropicalis
XB-GENE-6000457
N
0.000