PCH_Pc20g03270 (Penicillium rubens)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PCH_Pc20g03270 T255573_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.750 0.750
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.750 0.750
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.708 0.708
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAP85656 MADS box 10 57

Links

Other MADS box family TFs
Other Penicillium rubens TFs

243 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001472 Calypte anna Aan_R001472 N
Afo_R013021 Aptenodytes forsteri Afo_R013021 N
Alligator_sinensis_CCG015430.1 Alligator sinensis Alligator_sinensis_CCG015430.1 N
Brh_R004016 Buceros rhinoceros Brh_R004016 N
Cmyd_10020922 Chelonia mydas Cmyd_10020922 N
PRDM2 Anolis carolinensis ENSACAG00000010749 N
ENSAMEG00000006714 Ailuropoda melanoleuca ENSAMEG00000006714 N
ENSAPLG00000014764 Anas platyrhynchos ENSAPLG00000014764 N
ENSCAFG00000016361 Canis familiaris ENSCAFG00000016361 N
PRDM2 Equus caballus ENSECAG00000008911 N
PRDM2 Erinaceus europaeus ENSEEUG00000014607 N
ENSFALG00000009941 Ficedula albicollis ENSFALG00000009941 N
ENSGALG00000004089 Gallus gallus ENSGALG00000004089 N
PRDM2 Meleagris gallopavo ENSMGAG00000005888 N
PRDM2 Myotis lucifugus ENSMLUG00000006969 N
ENSMPUG00000016352 Mustela putorius furo ENSMPUG00000016352 N
PRDM2 Ornithorhynchus anatinus ENSOANG00000009908 N
ENSP00000235372-D1 Bos grunniens ENSP00000235372-D1 N
ENSPSIG00000005394 Pelodiscus sinensis ENSPSIG00000005394 N
PRDM2 Tursiops truncatus ENSTTRG00000005029 N
Gfo_R002647 Geospiza fortis Gfo_R002647 N
Myotis_brandtii_PRDM2_10022047 Myotis brandtii Myotis_brandtii_PRDM2_10022047 N
Ogr07692 Ophisaurus gracilis Ogr07692 N
prdm2 Xenopus tropicalis XB-GENE-5957530 N