PDE_01919 (Penicillium oxalicum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PDE_01919 T255582_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.750 0.750
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.750 0.750
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.708 0.708
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPS26979 MADS box 10 57

Links

Other MADS box family TFs
Other Penicillium oxalicum TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22317_YPR009W Saccharomyces mikatae 22317_YPR009W I 0.000
23380_YPR009W Saccharomyces paradoxus 23380_YPR009W I 0.000
25573_YPR009W Saccharomyces bayanus 25573_YPR009W I 0.000
AACERI_AaceriAEL298C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL298C I 0.000
Ecym_6122 Eremothecium cymbalariae Ecym_6122 N 0.000
Kpol_541p33 Vanderwaltozyma polyspora Kpol_541p33 I 0.000
SAKL0B03432g Lachancea kluyveri SAKL0B03432g N 0.000
TBLA_0F03550 Tetrapisispora blattae TBLA_0F03550 I 0.000
SUT2 Saccharomyces cerevisiae YPR009W D 0.000
ZYRO0F04928g Zygosaccharomyces rouxii ZYRO0F04928g I 0.000