PICST_68747 (Scheffersomyces stipitis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PICST_68747 T255769_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.812 0.812
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.812 0.812
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.792 0.792
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EAZ63499 MADS box 10 57

Links

Other MADS box family TFs
Other Scheffersomyces stipitis TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006196 Calypte anna Aan_R006196 I
Afo_R011287 Aptenodytes forsteri Afo_R011287 I
Alligator_sinensis_CCG021133.1 Alligator sinensis Alligator_sinensis_CCG021133.1 I
Brh_R003680 Buceros rhinoceros Brh_R003680 I
Cmyd_10007079 Chelonia mydas Cmyd_10007079 I
STAT3 Anolis carolinensis ENSACAG00000017940 I
ENSAMEG00000006266 Ailuropoda melanoleuca ENSAMEG00000006266 I
ENSAMXG00000000502 Astyanax mexicanus ENSAMXG00000000502 I
ENSAPLG00000007739 Anas platyrhynchos ENSAPLG00000007739 I
STAT3 Bos taurus ENSBTAG00000021523 I
ENSBTAP00000028687-D1 Bos grunniens ENSBTAP00000028687-D1 I
STAT3 Canis familiaris ENSCAFG00000015213 I
STAT3 Callithrix jacchus ENSCJAG00000000409 I
STAT3 Cavia porcellus ENSCPOG00000007939 I
ENSCSAG00000003215 Chlorocebus sabaeus ENSCSAG00000003215 I
stat3 Danio rerio ENSDARG00000022712 I
STAT3 Dasypus novemcinctus ENSDNOG00000001471 I
STAT3 Equus caballus ENSECAG00000016439 I
ENSFALG00000000674 Ficedula albicollis ENSFALG00000000674 I
STAT3 Felis catus ENSFCAG00000002154 I
STAT3 Homo sapiens ENSG00000168610 D
stat3 Gasterosteus aculeatus ENSGACG00000008607 I
STAT3 Gallus gallus ENSGALG00000003267 I
STAT3 Gorilla gorilla ENSGGOG00000017110 I
ENSGMOG00000014955 Gadus morhua ENSGMOG00000014955 I
ENSLACG00000012019 Latimeria chalumnae ENSLACG00000012019 I
STAT3 Loxodonta africana ENSLAFG00000014062 I
ENSLOCG00000012514 Lepisosteus oculatus ENSLOCG00000012514 I
ENSMEUG00000006663 Macropus eugenii ENSMEUG00000006663 I
STAT3 Meleagris gallopavo ENSMGAG00000003545 I
STAT3 Microcebus murinus ENSMICG00000012015 I
STAT3 Myotis lucifugus ENSMLUG00000017449 I
STAT3 Macaca mulatta ENSMMUG00000010707 I
ENSMMUP00000014032 Macaca fascicularis ENSMMUP00000014032 I
STAT3 Monodelphis domestica ENSMODG00000028212 I
ENSMPUG00000010509 Mustela putorius furo ENSMPUG00000010509 I
Stat3 Mus musculus ENSMUSG00000004040 D
ENSNLEG00000011454 Nomascus leucogenys ENSNLEG00000011454 I
ENSOARG00000001511 Ovis aries ENSOARG00000001511 I
STAT3 Oryctolagus cuniculus ENSOCUG00000011034 I
STAT3 Otolemur garnettii ENSOGAG00000001517 I
ENSONIG00000001148 Oreochromis niloticus ENSONIG00000001148 I
stat3 Oryzias latipes ENSORLG00000004061 I
ENSPANG00000021451 Papio anubis ENSPANG00000021451 I
ENSPFOG00000012687 Poecilia formosa ENSPFOG00000012687 I
ENSPFOG00000012990 Poecilia formosa ENSPFOG00000012990 I
ENSPMAG00000002770 Petromyzon marinus ENSPMAG00000002770 I
ENSPPYG00000008392 Pongo abelii ENSPPYG00000008392 I
Stat3 Rattus norvegicus ENSRNOG00000019742 I
STAT3 Sorex araneus ENSSARG00000014231 I
ENSSHAG00000014833 Sarcophilus harrisii ENSSHAG00000014833 I
STAT3 Sus scrofa ENSSSCG00000017403 I
ENSSTOG00000006741 Ictidomys tridecemlineatus ENSSTOG00000006741 I
STAT3 Taeniopygia guttata ENSTGUG00000002600 I
stat3 Takifugu rubripes ENSTRUG00000015348 I
STAT3 Tursiops truncatus ENSTTRG00000007163 I
ENSXMAG00000008972 Xiphophorus maculatus ENSXMAG00000008972 I
Gfo_R009044 Geospiza fortis Gfo_R009044 I
Myotis_brandtii_STAT3_10015327 Myotis brandtii Myotis_brandtii_STAT3_10015327 I
Ogr09154 Ophisaurus gracilis Ogr09154 I
Pvit_13933 Pogona vitticeps Pvit_13933 I
stat3.2 Xenopus tropicalis XB-GENE-1020976 I
stat3.2.L Xenopus laevis XB-GENE-1020979 I
stat3.1 Xenopus tropicalis XB-GENE-481047 I
stat3.1.L Xenopus laevis XB-GENE-865436 I