PVAR5_5878 (Byssochlamys spectabilis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PVAR5_5878 T256003_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.750 0.750
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.750 0.750
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.750 0.750
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GAD97205 MADS box 10 57

Links

Other MADS box family TFs
Other Byssochlamys spectabilis TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BOTBODRAFT_93542 Botryobasidium botryosum BOTBODRAFT_93542 N 0.000
BOTBODRAFT_99602 Botryobasidium botryosum BOTBODRAFT_99602 N 0.000
CY34DRAFT_83686 Suillus luteus CY34DRAFT_83686 N 0.000
DACRYDRAFT_76170 Dacryopinax sp DACRYDRAFT_76170 N 0.000
HYDPIDRAFT_93347 Hydnomerulius pinastri HYDPIDRAFT_93347 N 0.000
JAAARDRAFT_699402 Jaapia argillacea JAAARDRAFT_699402 N 0.000
K443DRAFT_686557 Laccaria amethystina K443DRAFT_686557 N 0.000
LACBIDRAFT_150072 Laccaria bicolor LACBIDRAFT_150072 N 0.000
M404DRAFT_96018 Pisolithus tinctorius M404DRAFT_96018 N 0.000
M407DRAFT_63745 Tulasnella calospora M407DRAFT_63745 N 0.000
Moror_3947 Moniliophthora roreri Moror_3947 N 0.000
PAXINDRAFT_79360 Paxillus involutus PAXINDRAFT_79360 N 0.000
PAXRUDRAFT_33323 Paxillus rubicundulus PAXRUDRAFT_33323 N 0.000
PIIN_04884 Piriformospora indica PIIN_04884 N 0.000
PILCRDRAFT_67276 Piloderma croceum PILCRDRAFT_67276 N 0.000
PISMIDRAFT_90191 Pisolithus microcarpus PISMIDRAFT_90191 N 0.000
PLEOSDRAFT_1046937 Pleurotus ostreatus PLEOSDRAFT_1046937 N 0.000
SCLCIDRAFT_130499 Scleroderma citrinum SCLCIDRAFT_130499 N 0.000
SERLA73DRAFT_29066 Serpula lacrymans SERLA73DRAFT_29066 N 0.000
V565_057560 Rhizoctonia solani V565_057560 N 0.000