scaffold_704060.1 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 scaffold_704060.1 T256127_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_704060.1 MADS box 21 66

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_03287 Arthroderma benhamiae ARB_03287 N
H101_00314 Trichophyton interdigitale H101_00314 N
H102_04019 Trichophyton rubrum H102_04019 N
H105_04047 Trichophyton soudanense H105_04047 N
MCYG_03897 Arthroderma otae MCYG_03897 N
MGYG_07750 Microsporum gypseum MGYG_07750 N
TEQG_03315 Trichophyton equinum TEQG_03315 N