SKUD_205813 (Saccharomyces kudriavzevii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 SKUD_205813 T256273_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RLM1
M08590_2.00
Saccharomyces cerevisiae
NTAWWWWTAG

CTAWWWWTAN
Misc
DeBoer et al.(2011)
YPL089C_419
1.000 1.000
RLM1
M08459_2.00
Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN

NDRKCTATWWWTAGAWHN
COMPILED
Mathelier et al.(2014)
MA0369.1
1.000 1.000
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA

TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.917 0.917
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN

NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.917 0.917
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT43116 MADS box 10 57

Links

Other MADS box family TFs
Other Saccharomyces kudriavzevii TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000002698 Ailuropoda melanoleuca ENSAMEG00000002698 I
ZNF212 Bos taurus ENSBTAG00000000389 I
ENSBTAP00000000499-D1 Bos grunniens ENSBTAP00000000499-D1 I
ZNF282 Canis familiaris ENSCAFG00000004442 I
ZNF212 Callithrix jacchus ENSCJAG00000010260 I
ZNF212 Dasypus novemcinctus ENSDNOG00000008381 I
Zfp212 Dipodomys ordii ENSDORG00000000581 I
ZNF212 Equus caballus ENSECAG00000012758 I
ZNF212 Felis catus ENSFCAG00000022357 I
ZNF212 Homo sapiens ENSG00000170260 D
ZNF783 Gorilla gorilla ENSGGOG00000006463 I
ZNF212 Loxodonta africana ENSLAFG00000006685 I
ENSMICG00000016621 Microcebus murinus ENSMICG00000016621 I
ZNF212 Macaca mulatta ENSMMUG00000011788 I
Zfp212 Mus musculus ENSMUSG00000052763 I
ENSNLEG00000026751 Nomascus leucogenys ENSNLEG00000026751 I
ZNF212 Otolemur garnettii ENSOGAG00000031023 I
ENSP00000338572 Macaca fascicularis ENSP00000338572 I
ENSPANG00000008719 Papio anubis ENSPANG00000008719 I
ENSPPYG00000018152 Pongo abelii ENSPPYG00000018152 I
ZNF212 Pan troglodytes ENSPTRG00000019842 I
ZNF212 Pteropus vampyrus ENSPVAG00000010869 I
Zfp212 Rattus norvegicus ENSRNOG00000006711 I
ENSSHAG00000018312 Sarcophilus harrisii ENSSHAG00000018312 I
ENSSSCG00000016777 Sus scrofa ENSSSCG00000016777 I
ZNF212 Tupaia belangeri ENSTBEG00000015249 I
ZNF212 Tursiops truncatus ENSTTRG00000015689 I
ZNF212 Vicugna pacos ENSVPAG00000009124 I