CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SKUD_205813
(
Saccharomyces kudriavzevii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
SKUD_205813
T256273_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLM1
M08590_2.00
Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN
Misc
DeBoer et al.(2011)
YPL089C_419
1.000
1.000
RLM1
M08459_2.00
Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN
COMPILED
Mathelier et al.(2014)
MA0369.1
1.000
1.000
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA
TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.917
0.917
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.917
0.917
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EJT43116
MADS box
10
57
RISDDRNRAVTFIKRKAGLFKKAHELSVLCQVDIAVIILGSNNTFYEF
Links
Other
MADS box
family TFs
Other
Saccharomyces kudriavzevii
TFs
195 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000002698
Ailuropoda melanoleuca
ENSAMEG00000002698
I
ZNF212
Bos taurus
ENSBTAG00000000389
I
ENSBTAP00000000499-D1
Bos grunniens
ENSBTAP00000000499-D1
I
ZNF282
Canis familiaris
ENSCAFG00000004442
I
ZNF212
Callithrix jacchus
ENSCJAG00000010260
I
ZNF212
Dasypus novemcinctus
ENSDNOG00000008381
I
Zfp212
Dipodomys ordii
ENSDORG00000000581
I
ZNF212
Equus caballus
ENSECAG00000012758
I
ZNF212
Felis catus
ENSFCAG00000022357
I
ZNF212
Homo sapiens
ENSG00000170260
D
ZNF783
Gorilla gorilla
ENSGGOG00000006463
I
ZNF212
Loxodonta africana
ENSLAFG00000006685
I
ENSMICG00000016621
Microcebus murinus
ENSMICG00000016621
I
ZNF212
Macaca mulatta
ENSMMUG00000011788
I
Zfp212
Mus musculus
ENSMUSG00000052763
I
ENSNLEG00000026751
Nomascus leucogenys
ENSNLEG00000026751
I
ZNF212
Otolemur garnettii
ENSOGAG00000031023
I
ENSP00000338572
Macaca fascicularis
ENSP00000338572
I
ENSPANG00000008719
Papio anubis
ENSPANG00000008719
I
ENSPPYG00000018152
Pongo abelii
ENSPPYG00000018152
I
ZNF212
Pan troglodytes
ENSPTRG00000019842
I
ZNF212
Pteropus vampyrus
ENSPVAG00000010869
I
Zfp212
Rattus norvegicus
ENSRNOG00000006711
I
ENSSHAG00000018312
Sarcophilus harrisii
ENSSHAG00000018312
I
ENSSSCG00000016777
Sus scrofa
ENSSSCG00000016777
I
ZNF212
Tupaia belangeri
ENSTBEG00000015249
I
ZNF212
Tursiops truncatus
ENSTTRG00000015689
I
ZNF212
Vicugna pacos
ENSVPAG00000009124
I