TCM_042799 (Theobroma cacao)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TCM_042799 T256486_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY18184 MADS box 10 58

Links

Other MADS box family TFs
Other Theobroma cacao TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CADANGAG00011564 Aspergillus niger CADANGAG00011564 I 0.000
CC1G_01982 Coprinopsis cinerea CC1G_01982 N 0.000
GLOTRDRAFT_115334 Gloeophyllum trabeum GLOTRDRAFT_115334 N 0.000
PV11_01869 Exophiala sideris PV11_01869 N 0.000