CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIREDRAFT_68097
(
Trichoderma reesei
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
TRIREDRAFT_68097
T256639_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA
TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.729
0.729
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.729
0.729
RLM1
M08590_2.00
Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN
Misc
DeBoer et al.(2011)
YPL089C_419
0.708
0.708
RLM1
M08459_2.00
Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN
COMPILED
Mathelier et al.(2014)
MA0369.1
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGR45572
MADS box
10
57
AIADDRNRSVTFLKRKGGLFKKAHELSVLCSVDVAVFIFGNNKKLYEY
Links
Other
MADS box
family TFs
Other
Trichoderma reesei
TFs
218 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
1645_YBR182C
Saccharomyces bayanus
1645_YBR182C
I
0.729
1735_Multiple
Saccharomyces paradoxus
1735_Multiple
I
0.729
21954_YPL089C
Saccharomyces mikatae
21954_YPL089C
I
0.708
25226_YPL089C
Saccharomyces bayanus
25226_YPL089C
I
0.708
572_YBR182C
Saccharomyces mikatae
572_YBR182C
I
0.729
A1O1_05243
Capronia coronata
A1O1_05243
I
0.896
A1O3_09529
Capronia epimyces
A1O3_09529
I
0.896
A1O5_02336
Cladophialophora psammophila
A1O5_02336
I
0.896
A1O7_07076
Cladophialophora yegresii
A1O7_07076
I
0.896
A1O9_04901
Exophiala aquamarina
A1O9_04901
I
0.896
AB03118.1
Alternaria brassicicola
AB03118.1
I
0.917
ACRE_047770
Acremonium chrysogenum
ACRE_047770
I
0.958
AGABI2DRAFT_192991
Agaricus bisporus
AGABI2DRAFT_192991
N
0.750
AOL_s00078g125
Arthrobotrys oligospora
AOL_s00078g125
N
0.875
ARB_05322
Arthroderma benhamiae
ARB_05322
I
0.896
AUEXF2481DRAFT_43803
Aureobasidium subglaciale
AUEXF2481DRAFT_43803
I
0.875
BAUCODRAFT_25460
Baudoinia compniacensis
BAUCODRAFT_25460
I
0.909
BBA_05338
Beauveria bassiana
BBA_05338
I
0.979
Bcin05g04030
Botrytis cinerea
Bcin05g04030
I
0.917
BDDG_00259
Blastomyces dermatitidis
BDDG_00259
I
0.917
BGHDH14_bghG002741000001001
Blumeria graminis
BGHDH14_bghG002741000001001
I
0.958
BN946_scf184783.g11
Trametes cinnabarina
BN946_scf184783.g11
N
0.743
BOTBODRAFT_121202
Botryobasidium botryosum
BOTBODRAFT_121202
I
0.792
ACLA_036490
Aspergillus clavatus
CADACLAG00003970
I
0.896
CADAFLAG00001438
Aspergillus flavus
CADAFLAG00001438
I
0.896
AFUA_3G08520
Aspergillus fumigatus
CADAFUAG00005633
I
0.896
CADANGAG00002744
Aspergillus niger
CADANGAG00002744
I
0.896
ANIA_02984
Aspergillus nidulans
CADANIAG00010096
I
0.896
CADAORAG00003304
Aspergillus oryzae
CADAORAG00003304
I
0.896
ATEG_01619
Aspergillus terreus
CADATEAG00002690
I
0.896
NFIA_068610
Neosartorya fischeri
CADNFIAG00006321
I
0.896
CAGL0H05621g
Candida glabrata
CAGL0H05621g
I
0.708
CANTEDRAFT_125008
Candida tenuis
CANTEDRAFT_125008
I
0.708
CaO19.12132
Candida albicans
CaO19.12132
I
0.708
CaO19.4662
Candida albicans
CaO19.4662
I
0.708
CCM_07679
Cordyceps militaris
CCM_07679
N
0.939
CERSUDRAFT_112805
Ceriporiopsis subvermispora
CERSUDRAFT_112805
N
0.750
CFIO01_13635
Colletotrichum fioriniae
CFIO01_13635
I
0.958
CH063_12469
Colletotrichum higginsianum
CH063_12469
I
0.958
CHGG_01378
Chaetomium globosum
CHGG_01378
N
0.833
CIMG_07638
Coccidioides immitis
CIMG_07638
I
0.896
CMQ_3522
Grosmannia clavigera
CMQ_3522
I
0.958
Cob_13332
Colletotrichum orbiculare
Cob_13332
I
0.958
COCC4DRAFT_131332
Bipolaris maydis
COCC4DRAFT_131332
I
0.917
COCCADRAFT_38888
Bipolaris zeicola
COCCADRAFT_38888
I
0.917
COCMIDRAFT_27992
Bipolaris oryzae
COCMIDRAFT_27992
I
0.917
COCSADRAFT_191180
Bipolaris sorokiniana
COCSADRAFT_191180
I
0.917
COCVIDRAFT_17132
Bipolaris victoriae
COCVIDRAFT_17132
I
0.917
CPC735_043100
Coccidioides posadasii
CPC735_043100
I
0.896
CPUR_08194
Claviceps purpurea
CPUR_08194
I
0.979
CSUB01_02910
Colletotrichum sublineola
CSUB01_02910
I
0.958
CTHT_0055000
Chaetomium thermophilum
CTHT_0055000
I
0.958
CTRG_00027
Candida tropicalis
CTRG_00027
I
0.708
CY34DRAFT_134098
Suillus luteus
CY34DRAFT_134098
N
0.750
DACRYDRAFT_49314
Dacryopinax sp
DACRYDRAFT_49314
N
0.771
DEHA2B02882g
Debaryomyces hansenii
DEHA2B02882g
I
0.708
DOTSEDRAFT_71657
Dothistroma septosporum
DOTSEDRAFT_71657
I
0.938
DRE_05946
Drechslerella stenobrocha
DRE_05946
N
0.854
MEF2A
Homo sapiens
ENSG00000068305
D
0.724
EPUS_00923
Endocarpon pusillum
EPUS_00923
I
0.917
estExt_fgenesh1_pm.C_110082
Mycosphaerella fijiensis
estExt_fgenesh1_pm.C_110082
I
0.917
estExt_fgenesh1_pm.C_30002
Cochliobolus heterostrophus C5
estExt_fgenesh1_pm.C_30002
I
0.917
estExt_fgenesh2_pg.C_20596
Neurospora discreta
estExt_fgenesh2_pg.C_20596
I
0.958
estExt_Genewise1.C_41737
Cryphonectria parasitica
estExt_Genewise1.C_41737
I
0.958
EURHEDRAFT_408541
Aspergillus ruber
EURHEDRAFT_408541
I
0.896
EV44_g2988
Erysiphe necator
EV44_g2988
I
0.938
e_gw1.10.299.1
Sporobolomyces roseus
e_gw1.10.299.1
N
0.708
F503_03505
Ophiostoma piceae uamh
F503_03505
I
0.938
FFUJ_04051
Fusarium fujikuroi
FFUJ_04051
I
0.979
fgenesh1_pg.C_scaffold_3000539
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_3000539
N
0.732
fgenesh1_pg.sca_1_chr1_3_0001184
Nectria haematococca
fgenesh1_pg.sca_1_chr1_3_0001184
I
0.979
fgenesh1_pm.00866_#_723
Aspergillus carbonarius
fgenesh1_pm.00866_#_723
I
0.896
FGRRES_09339
Fusarium graminearum
FGRRES_09339
I
0.979
FIBRA_04735
Fibroporia radiculosa
FIBRA_04735
N
0.743
FOXG_05887
Fusarium oxysporum
FOXG_05887
I
0.979
FPSE_05044
Fusarium pseudograminearum
FPSE_05044
I
0.979
FVEG_03759
Fusarium verticillioides
FVEG_03759
I
0.979
G647_03030
Cladophialophora carrionii
G647_03030
I
0.896
GALMADRAFT_1298303
Galerina marginata
GALMADRAFT_1298303
N
0.733
GALMADRAFT_75179
Galerina marginata
GALMADRAFT_75179
N
0.750
GALMADRAFT_91917
Galerina marginata
GALMADRAFT_91917
N
0.729
GGTG_04012
Gaeumannomyces graminis
GGTG_04012
I
0.958
GLOTRDRAFT_133387
Gloeophyllum trabeum
GLOTRDRAFT_133387
N
0.743
GLRG_00647
Colletotrichum graminicola
GLRG_00647
I
0.958
GMDG_00759
Pseudogymnoascus destructans
GMDG_00759
I
0.958
GNLVRS01_PISO0M22936g
Millerozyma farinosa
GNLVRS01_PISO0M22936g
I
0.729
GNLVRS01_PISO0N23201g
Millerozyma farinosa
GNLVRS01_PISO0N23201g
I
0.708
GSTUM_00008714001
Tuber melanosporum
GSTUM_00008714001
I
0.917
GYMLUDRAFT_115352
Gymnopus luxurians
GYMLUDRAFT_115352
N
0.766
H072_1342
Dactylellina haptotyla
H072_1342
N
0.875
H101_08129
Trichophyton interdigitale
H101_08129
I
0.896
H102_05233
Trichophyton rubrum
H102_05233
I
0.896
H105_05252
Trichophyton soudanense
H105_05252
I
0.896
HCBG_00204
Histoplasma capsulatum
HCBG_00204
I
0.917
HETIRDRAFT_459848
Heterobasidion irregulare
HETIRDRAFT_459848
N
0.750
HMPREF1120_02025
Exophiala dermatitidis
HMPREF1120_02025
I
0.896
HMPREF1541_07944
Cyphellophora europaea
HMPREF1541_07944
I
0.917
HMPREF1624_03092
Sporothrix schenckii
HMPREF1624_03092
I
0.938
HPODL_00493
Ogataea parapolymorpha
HPODL_00493
I
0.708
J056_003833
Wallemia ichthyophaga
J056_003833
N
0.750
JAAARDRAFT_30535
Jaapia argillacea
JAAARDRAFT_30535
N
0.750
JL09_g2233
Pichia kudriavzevii
JL09_g2233
I
0.708
K443DRAFT_361864
Laccaria amethystina
K443DRAFT_361864
N
0.750
KAFR_0E00800
Kazachstania africana
KAFR_0E00800
I
0.708
KAFR_0I00730
Kazachstania africana
KAFR_0I00730
I
0.708
KUCA_T00000739001
Kuraishia capsulata
KUCA_T00000739001
I
0.708
LACBIDRAFT_293207
Laccaria bicolor
LACBIDRAFT_293207
N
0.743
LEMA_P028590.1
Leptosphaeria maculans
LEMA_P028590.1
I
0.917
M378DRAFT_55133
Amanita muscaria
M378DRAFT_55133
N
0.708
M404DRAFT_388312
Pisolithus tinctorius
M404DRAFT_388312
N
0.750
M407DRAFT_240766
Tulasnella calospora
M407DRAFT_240766
N
0.729
M422DRAFT_782754
Sphaerobolus stellatus
M422DRAFT_782754
N
0.729
M437DRAFT_42083
Aureobasidium melanogenum
M437DRAFT_42083
I
0.896
M438DRAFT_316511
Aureobasidium pullulans
M438DRAFT_316511
I
0.896
M7I_1656
Glarea lozoyensis
M7I_1656
I
0.935
MAC_07653
Metarhizium acridum
MAC_07653
I
0.979
MAJ_09006
Metarhizium majus
MAJ_09006
I
0.979
MAM_07626
Metarhizium album
MAM_07626
N
0.927
MANI_022643
Metarhizium anisopliae
MANI_022643
I
0.979
MAPG_00433
Magnaporthe poae
MAPG_00433
I
0.958
MBM_03922
Marssonina brunnea
MBM_03922
I
0.958
MBR_00020
Metarhizium brunneum
MBR_00020
I
0.979
MCYG_04979
Microsporum canis
MCYG_04979
I
0.896
MCYG_04979
Arthroderma otae
MCYG_04979
I
0.896
MGG_01204
Magnaporthe oryzae
MGG_01204
I
0.958
MGU_09177
Metarhizium guizhouense
MGU_09177
I
0.979
MGYG_07902
Microsporum gypseum
MGYG_07902
I
0.896
Moror_4352
Moniliophthora roreri
Moror_4352
N
0.771
MPER_07979
Moniliophthora perniciosa
MPER_07979
N
0.708
MPH_05126
Macrophomina phaseolina
MPH_05126
I
0.917
MYCFIDRAFT_72135
Pseudocercospora fijiensis
MYCFIDRAFT_72135
I
0.917
Mycgr3G71585
Zymoseptoria tritici
Mycgr3G71585
I
0.917
MYCTH_2295245
Myceliophthora thermophila
MYCTH_2295245
N
0.833
NCU02558
Neurospora crassa
NCU02558
I
0.958
NechaG75573
Fusarium solani
NechaG75573
I
0.979
NEUTE1DRAFT_126496
Neurospora tetrasperma
NEUTE1DRAFT_126496
I
0.958
OIDMADRAFT_105313
Oidiodendron maius
OIDMADRAFT_105313
I
0.958
PAAG_00645
Paracoccidioides sp lutzii
PAAG_00645
I
0.917
PABG_01574
Paracoccidioides brasiliensis
PABG_01574
I
0.917
PAXRUDRAFT_563586
Paxillus rubicundulus
PAXRUDRAFT_563586
N
0.719
Pc20g03270
Penicillium chrysogenum
Pc20g03270
I
0.917
PCH_Pc20g03270
Penicillium rubens
PCH_Pc20g03270
I
0.917
PDE_01919
Penicillium oxalicum
PDE_01919
I
0.917
PDIP_09010
Penicillium digitatum
PDIP_09010
I
0.917
PEX1_000400
Penicillium expansum
PEX1_000400
I
0.917
PFICI_06921
Pestalotiopsis fici
PFICI_06921
I
0.958
PGUG_02571
Candida guilliermondii
PGUG_02571
I
0.729
PGUG_02571
Meyerozyma guilliermondii
PGUG_02571
I
0.729
PHACADRAFT_58963
Phanerochaete carnosa
PHACADRAFT_58963
N
0.750
PHLGIDRAFT_36660
Phlebiopsis gigantea
PHLGIDRAFT_36660
N
0.750
PILCRDRAFT_571433
Piloderma croceum
PILCRDRAFT_571433
N
0.750
PILCRDRAFT_603306
Piloderma croceum
PILCRDRAFT_603306
N
0.750
PISMIDRAFT_680570
Pisolithus microcarpus
PISMIDRAFT_680570
N
0.771
PITC_001660
Penicillium italicum
PITC_001660
I
0.917
PLEOSDRAFT_1033113
Pleurotus ostreatus
PLEOSDRAFT_1033113
N
0.750
PMAA_013140
Talaromyces marneffei
PMAA_013140
I
0.917
PMAA_013140
Penicillium marneffei
PMAA_013140
I
0.917
PODANS_1_6600
Podospora anserina
PODANS_1_6600
I
0.958
POSPLDRAFT_104793
Postia placenta
POSPLDRAFT_104793
N
0.727
PTRG_08080
Pyrenophora triticirepentis
PTRG_08080
I
0.917
PTT_15886
Pyrenophora teres
PTT_15886
I
0.917
PV04_07501
Capronia semiimmersa
PV04_07501
I
0.896
PV05_05426
Exophiala xenobiotica
PV05_05426
I
0.896
PV06_00786
Exophiala oligosperma
PV06_00786
I
0.896
PV07_11277
Cladophialophora immunda
PV07_11277
I
0.896
PV08_00691
Exophiala spinifera
PV08_00691
I
0.917
PV09_04800
Verruconis gallopava
PV09_04800
I
0.875
PV10_07771
Exophiala mesophila
PV10_07771
I
0.896
PV11_00659
Exophiala sideris
PV11_00659
I
0.896
PVAR5_5878
Byssochlamys spectabilis
PVAR5_5878
I
0.917
RHTO_02226
Rhodosporidium toruloides
RHTO_02226
N
0.708
RTG_02132
Rhodotorula glutinis
RTG_02132
N
0.708
S40288_07194
Stachybotrys chartarum
S40288_07194
I
0.958
SAPIO_CDS1437
Scedosporium apiospermum
SAPIO_CDS1437
I
0.938
SBOR_4659
Sclerotinia borealis
SBOR_4659
I
0.938
SCHCODRAFT_258818
Schizophyllum commune
SCHCODRAFT_258818
N
0.729
SCHCODRAFT_81364
Schizophyllum commune
SCHCODRAFT_81364
N
0.708
SCLCIDRAFT_969057
Scleroderma citrinum
SCLCIDRAFT_969057
N
0.750
SEPMUDRAFT_148874
Sphaerulina musiva
SEPMUDRAFT_148874
I
0.917
SERLA73DRAFT_185178
Serpula lacrymans
SERLA73DRAFT_185178
N
0.750
SETTUDRAFT_183592
Setosphaeria turcica
SETTUDRAFT_183592
I
0.917
SKUD_178506
Saccharomyces kudriavzevii
SKUD_178506
I
0.729
SKUD_205813
Saccharomyces kudriavzevii
SKUD_205813
I
0.708
SMAC_05802
Sordaria macrospora
SMAC_05802
I
0.958
SNOG_15194
Stagonospora nodorum
SNOG_15194
I
0.917
SNOG_15194
Phaeosphaeria nodorum
SNOG_15194
N
0.795
SPBR_01444
Sporothrix brasiliensis
SPBR_01444
I
0.938
SS1G_06124
Sclerotinia sclerotiorum
SS1G_06124
I
0.938
SU7_0243
Saccharomyces arboricola
SU7_0243
I
0.729
SU7_3566
Saccharomyces arboricola
SU7_3566
I
0.708
TEQG_02757
Trichophyton equinum
TEQG_02757
I
0.896
TESG_06676
Trichophyton tonsurans
TESG_06676
I
0.896
THITE_2122084
Thielavia terrestris
THITE_2122084
I
0.938
TRIATDRAFT_288492
Trichoderma atroviride
TRIATDRAFT_288492
I
0.979
TRIVIDRAFT_144166
Trichoderma virens
TRIVIDRAFT_144166
I
0.979
TRV_06898
Trichophyton verrucosum
TRV_06898
I
0.896
TSTA_004010
Talaromyces stipitatus
TSTA_004010
I
0.896
U727_00434011531
Penicillium solitum
U727_00434011531
I
0.917
UCREL1_8460
Eutypa lata
UCREL1_8460
I
0.958
UCRNP2_3485
Neofusicoccum parvum
UCRNP2_3485
I
0.917
UCRPA7_1246
Togninia minima
UCRPA7_1246
I
0.958
UREG_07644
Uncinocarpus reesii
UREG_07644
I
0.896
UV8b_2080
Ustilaginoidea virens
UV8b_2080
I
0.979
V499_02013
Pseudogymnoascus pannorum
V499_02013
I
0.958
V565_186740
Rhizoctonia solani
V565_186740
I
0.792
VDAG_00939
Verticillium dahliae
VDAG_00939
I
0.979
VDBG_03707
Verticillium albo atrum
VDBG_03707
N
0.893
VDBG_03707
Verticillium alfalfae
VDBG_03707
N
0.893
VHEMI03693
Torrubiella hemipterigena
VHEMI03693
I
0.979
W97_01089
Coniosporium apollinis
W97_01089
I
0.917
WALSEDRAFT_59614
Wallemia sebi
WALSEDRAFT_59614
N
0.771
X797_009919
Metarhizium robertsii
X797_009919
I
0.979
YALI0_F18788g
Yarrowia lipolytica
YALI0_F18788g
I
0.729
SMP1
Saccharomyces cerevisiae
YBR182C
D
0.729
RLM1
Saccharomyces cerevisiae
YPL089C
D
0.708
Z517_02667
Fonsecaea pedrosoi
Z517_02667
I
0.896
Z518_09438
Rhinocladiella mackenziei
Z518_09438
I
0.896
Z519_11638
Cladophialophora bantiana
Z519_11638
I
0.896