CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm026039
(
Prunus mume
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Pm026039
T257087_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm026039
MADS box
10
58
WIVNDAARKATLRKRRANLLKKLRELTILCDVNGLIIVYGPDSDEPVVW
Links
Other
MADS box
family TFs
Other
Prunus mume
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R013359
Aptenodytes forsteri
Afo_R013359
I
irf2a
Danio rerio
ENSDARG00000007387
I
irf2
Danio rerio
ENSDARG00000040465
I
IRF2
Equus caballus
ENSECAG00000007508
I
ENSLOCG00000013738
Lepisosteus oculatus
ENSLOCG00000013738
I
Irf2
Rattus norvegicus
ENSRNOG00000009824
I
irf2
Takifugu rubripes
ENSTRUG00000001842
I