estExt_fgenesh1_pm.C_110082 (Mycosphaerella fijiensis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 estExt_fgenesh1_pm.C_110082 T257327_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.771 0.771
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.771 0.771
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_110082 MADS box 10 57

Links

Other MADS box family TFs
Other Mycosphaerella fijiensis TFs

261 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CG8765 Drosophila melanogaster FBgn0036900 D
GA21303 Drosophila pseudoobscura FBgn0081291 I
GF10717 Drosophila ananassae FBgn0087758 I
GG13380 Drosophila erecta FBgn0105652 I
GH14617 Drosophila grimshawi FBgn0122093 N
GI13504 Drosophila mojavensis FBgn0136259 N
GM16842 Drosophila sechellia FBgn0171755 I
GD12257 Drosophila simulans FBgn0183992 I
GJ11865 Drosophila virilis FBgn0199119 N
GK25760 Drosophila willistoni FBgn0227719 I
GE22473 Drosophila yakuba FBgn0239693 I
LCUP001542 Lucilia cuprina LCUP001542 N
MDOA007247 Musca domestica MDOA007247 N