estExt_fgenesh2_pg.C_20596 (Neurospora discreta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 estExt_fgenesh2_pg.C_20596 T257330_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.771 0.771
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.771 0.771
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_20596 MADS box 10 57

Links

Other MADS box family TFs
Other Neurospora discreta TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000004743 Astyanax mexicanus ENSAMXG00000004743 N
bcl6a Danio rerio ENSDARG00000070864 N
bcl6a Gasterosteus aculeatus ENSGACG00000003839 N
ENSGMOG00000019214 Gadus morhua ENSGMOG00000019214 N
ENSONIG00000019322 Oreochromis niloticus ENSONIG00000019322 N
bcl6a Oryzias latipes ENSORLG00000015589 N
ENSPFOG00000001561 Poecilia formosa ENSPFOG00000001561 N
bcl6a Tetraodon nigroviridis ENSTNIG00000013771 N
bcl6 Takifugu rubripes ENSTRUG00000002214 N