CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.15774s0044
(
Boechera stricta
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Bostr.15774s0044
T257584_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT5G38620
M10931_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT5G38620_01
0.771
0.771
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.15774s0044.1.p
MADS box
14
65
TIMNKSSLRPICTKRRNGLFSKASQICLLSGAQIAILATPPSSESNVSFYSF
Links
Other
MADS box
family TFs
Other
Boechera stricta
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F503_04497
Ophiostoma piceae uamh
F503_04497
N
H072_3849
Dactylellina haptotyla
H072_3849
N
PV05_06937
Exophiala xenobiotica
PV05_06937
N
PV07_09452
Cladophialophora immunda
PV07_09452
N
PV08_09945
Exophiala spinifera
PV08_09945
N
PV11_05393
Exophiala sideris
PV11_05393
N
SPBR_06691
Sporothrix brasiliensis
SPBR_06691
N
SS1G_05808
Sclerotinia sclerotiorum
SS1G_05808
N