CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.0824s0100
(
Capsella grandiflora
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Cagra.0824s0100
T257664_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0824s0100.1.p
MADS box
56
103
EIIEESKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSRCNRIYRF
Links
Other
MADS box
family TFs
Other
Capsella grandiflora
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC12G02310
Oryza punctata
OPUNC12G02310
N
Pavir.Hb01986
Panicum virgatum
Pavir.Hb01986
N