Carubv10021917m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10021917m.g T257808_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G38620
M10931_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G38620_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10021917m MADS box 12 63

Links

Other MADS box family TFs
Other Capsella rubella TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB04375.1 Alternaria brassicicola AB04375.1 I 0.000
ACRE_001610 Acremonium chrysogenum ACRE_001610 N 0.000
ANIA_04077 Aspergillus nidulans CADANIAG00004604 I 0.000
CCM_01786 Cordyceps militaris CCM_01786 N 0.000
CHGG_02890 Chaetomium globosum CHGG_02890 I 0.000
CIMG_03917 Coccidioides immitis CIMG_03917 I 0.000
COCC4DRAFT_126547 Bipolaris maydis COCC4DRAFT_126547 I 0.000
COCCADRAFT_37717 Bipolaris zeicola COCCADRAFT_37717 I 0.000
COCMIDRAFT_84665 Bipolaris oryzae COCMIDRAFT_84665 I 0.000
COCSADRAFT_102727 Bipolaris sorokiniana COCSADRAFT_102727 I 0.000
COCVIDRAFT_34345 Bipolaris victoriae COCVIDRAFT_34345 I 0.000
CPC735_004330 Coccidioides posadasii CPC735_004330 I 0.000
CTHT_0024110 Chaetomium thermophilum CTHT_0024110 I 0.000
EPUS_04985 Endocarpon pusillum EPUS_04985 I 0.000
e_gw1.00129.236.1 Aspergillus carbonarius e_gw1.00129.236.1 I 0.000
FFUJ_03219 Fusarium fujikuroi FFUJ_03219 N 0.000
FGRRES_07243 Fusarium graminearum FGRRES_07243 N 0.000
FOXG_02174 Fusarium oxysporum FOXG_02174 N 0.000
FPSE_00192 Fusarium pseudograminearum FPSE_00192 N 0.000
FVEG_05341 Fusarium verticillioides FVEG_05341 N 0.000
GGTG_08149 Gaeumannomyces graminis GGTG_08149 I 0.000
gw1.3.1452.1 Nectria haematococca gw1.3.1452.1 N 0.000
HCBG_06971 Histoplasma capsulatum HCBG_06971 I 0.000
LEMA_P018010.1 Leptosphaeria maculans LEMA_P018010.1 I 0.000
M437DRAFT_83473 Aureobasidium melanogenum M437DRAFT_83473 I 0.000
MAC_08651 Metarhizium acridum MAC_08651 N 0.000
MAM_02403 Metarhizium album MAM_02403 N 0.000
MANI_008576 Metarhizium anisopliae MANI_008576 N 0.000
MAPG_07954 Magnaporthe poae MAPG_07954 I 0.000
MBR_01178 Metarhizium brunneum MBR_01178 N 0.000
MCYG_00903 Arthroderma otae MCYG_00903 I 0.000
MCYG_00903 Microsporum canis MCYG_00903 I 0.000
MGU_01854 Metarhizium guizhouense MGU_01854 N 0.000
MPH_05713 Macrophomina phaseolina MPH_05713 I 0.000
MYCTH_2304200 Myceliophthora thermophila MYCTH_2304200 I 0.000
NechaG23657 Fusarium solani NechaG23657 N 0.000
OCS_02929 Ophiocordyceps sinensis OCS_02929 N 0.000
PAAG_08645 Paracoccidioides sp lutzii PAAG_08645 I 0.000
PABG_02907 Paracoccidioides brasiliensis PABG_02907 I 0.000
Pc18g02200 Penicillium chrysogenum Pc18g02200 I 0.000
PCH_Pc18g02200 Penicillium rubens PCH_Pc18g02200 I 0.000
PDE_02765 Penicillium oxalicum PDE_02765 I 0.000
PDIP_73930 Penicillium digitatum PDIP_73930 I 0.000
PEX1_076370 Penicillium expansum PEX1_076370 I 0.000
PFICI_03782 Pestalotiopsis fici PFICI_03782 I 0.000
PITC_027910 Penicillium italicum PITC_027910 I 0.000
PMAA_024740 Penicillium marneffei PMAA_024740 I 0.000
PMAA_024740 Talaromyces marneffei PMAA_024740 I 0.000
PODANS_7_2090 Podospora anserina PODANS_7_2090 I 0.000
PTRG_00243 Pyrenophora triticirepentis PTRG_00243 I 0.000
PTT_13020 Pyrenophora teres PTT_13020 I 0.000
PVAR5_6448 Byssochlamys spectabilis PVAR5_6448 I 0.000
S40285_01213 Stachybotrys chlorohalonata S40285_01213 N 0.000
S40288_05241 Stachybotrys chartarum S40288_05241 N 0.000
SETTUDRAFT_102560 Setosphaeria turcica SETTUDRAFT_102560 I 0.000
SNOG_11811 Phaeosphaeria nodorum SNOG_11811 I 0.000
THITE_2119520 Thielavia terrestris THITE_2119520 I 0.000
TRIATDRAFT_164783 Trichoderma atroviride TRIATDRAFT_164783 N 0.000
TRIREDRAFT_57756 Trichoderma reesei TRIREDRAFT_57756 N 0.000
TRIVIDRAFT_12894 Trichoderma virens TRIVIDRAFT_12894 N 0.000
TSTA_033430 Talaromyces stipitatus TSTA_033430 I 0.000
U727_00431293291 Penicillium solitum U727_00431293291 I 0.000
UCRNP2_6191 Neofusicoccum parvum UCRNP2_6191 I 0.000
UV8b_7435 Ustilaginoidea virens UV8b_7435 N 0.000
VHEMI05316 Torrubiella hemipterigena VHEMI05316 N 0.000
X797_001665 Metarhizium robertsii X797_001665 N 0.000