CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10027564m.g
(
Capsella rubella
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Carubv10027564m.g
T257840_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10027564m
MADS box
10
55
KIQNEKTRITTYKKRKACLYKKASEFSTLCGVDTCLIVYGPSRAGD
Links
Other
MADS box
family TFs
Other
Capsella rubella
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSOARG00000019296
Ovis aries
ENSOARG00000019296
N
0.000
TsM_000867800
Taenia solium
TsM_000867800
N
0.000
TTAC_0000959501
Hydatigera taeniaeformis
TTAC_0000959501
N
0.000