CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10027979m.g
(
Capsella rubella
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Carubv10027979m.g
T257841_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10027979m
MADS box
10
56
RIANDKTRITTYKKRKANLYKKAAEFSTLCGVKTCLIVYGPTKATDE
Links
Other
MADS box
family TFs
Other
Capsella rubella
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.G01061
Eucalyptus grandis
Eucgr.G01061
N
Eucgr.G01073
Eucalyptus grandis
Eucgr.G01073
N
Eucgr.G01075
Eucalyptus grandis
Eucgr.G01075
N
Eucgr.L01924
Eucalyptus grandis
Eucgr.L01924
N
Eucgr.L01925
Eucalyptus grandis
Eucgr.L01925
N
Eucgr.L02201
Eucalyptus grandis
Eucgr.L02201
N
Eucgr.L02695
Eucalyptus grandis
Eucgr.L02695
N
Eucgr.L03347
Eucalyptus grandis
Eucgr.L03347
N