CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.contig_24864.2
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.contig_24864.2
T258031_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_24864.2
MADS box
2
42
TKKKKSYFQEKEEEFMKKVSELSMLCKVKACEIIYSPYDWQ
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL012562
Aedes aegypti
AAEL012562
N
AALB004151
Anopheles albimanus
AALB004151
N
AARA005712
Anopheles arabiensis
AARA005712
N
AATE001068
Anopheles atroparvus
AATE001068
N
ACEP20954
Atta cephalotes
ACEP20954
I
ACHR008870
Anopheles christyi
ACHR008870
N
ACOM031194
Anopheles coluzzii
ACOM031194
N
ACUA003634
Anopheles culicifacies
ACUA003634
N
ADAC005680
Anopheles darlingi
ADAC005680
N
ADIR007538
Anopheles dirus
ADIR007538
N
AEPI008163
Anopheles epiroticus
AEPI008163
N
AFAF004824
Anopheles farauti
AFAF004824
N
AFUN011810
Anopheles funestus
AFUN011810
N
CLK
Anopheles gambiae
AGAP005711
N
AMEC012294
Anopheles melas
AMEC012294
N
AMEM015248
Anopheles merus
AMEM015248
N
AMIN011013
Anopheles minimus
AMIN011013
N
AQUA011172
Anopheles quadriannulatus
AQUA011172
N
ASTEI06385
Anopheles stephensi
ASTEI06385
N
Cflo_02744--XP_394233.3_APIME
Camponotus floridanus
Cflo_02744--XP_394233.3_APIME
I
CLEC000211
Cimex lectularius
CLEC000211
I
CPIJ002146
Culex quinquefasciatus
CPIJ002146
N
CpipJ_CPIJ002146
Culex pipiens
CpipJ_CPIJ002146
N
DAPPUDRAFT_346996
Daphnia pulex
DAPPUDRAFT_346996
I
Clk
Drosophila melanogaster
FBgn0023076
D
GA20318
Drosophila pseudoobscura
FBgn0080313
I
GF24152
Drosophila ananassae
FBgn0101146
I
GG14938
Drosophila erecta
FBgn0107192
I
GH16514
Drosophila grimshawi
FBgn0123985
I
GI12195
Drosophila mojavensis
FBgn0134952
I
GL17825
Drosophila persimilis
FBgn0155428
I
GM24989
Drosophila sechellia
FBgn0179850
I
GD13034
Drosophila simulans
FBgn0184756
I
GK10694
Drosophila willistoni
FBgn0212707
I
GE20390
Drosophila yakuba
FBgn0237706
I
GB48028
Apis mellifera
GB48028
I
HHAL003628-PA
Halyomorpha halys
HHAL003628-PA
I
HMEL008784
Heliconius melpomene
HMEL008784
I
Hsal_05831--XP_394233.3_APIME
Harpegnathos saltator
Hsal_05831--XP_394233.3_APIME
I
KGM_10878
Danaus plexippus
KGM_10878
I
MCINX000525
Melitaea cinxia
MCINX000525
I
PHUM426300
Pediculus humanus
PHUM426300
I
PPAI002844
Phlebotomus papatasi
PPAI002844
I
RPRC002110
Rhodnius prolixus
RPRC002110
I
TC000088
Tribolium castaneum
TC000088
I
YQE_03736
Dendroctonus ponderosae
YQE_03736
I