evm.TU.contig_31147 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_31147 T258063_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_31147.1 MADS box 10 55

Links

Other MADS box family TFs
Other Carica papaya TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CANTEDRAFT_94621 Candida tenuis CANTEDRAFT_94621 N 0.000
FFUJ_13903 Fusarium fujikuroi FFUJ_13903 N 0.000
GNLVRS01_PISO0B12585g Millerozyma farinosa GNLVRS01_PISO0B12585g N 0.000
MGG_13894 Magnaporthe oryzae MGG_13894 N 0.000