evm.TU.contig_35265 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_35265 T258085_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_35265.1 MADS box 10 31

Links

Other MADS box family TFs
Other Carica papaya TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BAUCODRAFT_37166 Baudoinia compniacensis BAUCODRAFT_37166 I 0.000
GGTG_02836 Gaeumannomyces graminis GGTG_02836 I 0.000
HMPREF1624_05867 Sporothrix schenckii HMPREF1624_05867 N 0.000
MAPG_00999 Magnaporthe poae MAPG_00999 I 0.000
PV09_03219 Verruconis gallopava PV09_03219 I 0.000
SEPMUDRAFT_148959 Sphaerulina musiva SEPMUDRAFT_148959 I 0.000
SPBR_00126 Sporothrix brasiliensis SPBR_00126 N 0.000